Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL392103.1-201ENST00000447000 198 ntBASIC0.91□□□□□ -2.26
VTNP04004 RNU7-96P-201ENST00000459535 64 ntBASIC0.91□□□□□ -2.26
VTNP04004 AC107027.2-201ENST00000512197 115 ntBASIC0.91□□□□□ -2.26
VTNP04004 RNU6-998P-201ENST00000515894 101 ntBASIC0.91□□□□□ -2.26
VTNP04004 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
VTNP04004 MIR5000-201ENST00000577717 103 ntBASIC0.91□□□□□ -2.26
VTNP04004 AL365205.2-201ENST00000594586 68 ntBASIC0.91□□□□□ -2.26
VTNP04004 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VTNP04004 RNU6-1292P-201ENST00000383856 107 ntBASIC0.9□□□□□ -2.27
VTNP04004 SNORA24-201ENST00000384096 131 ntBASIC0.9□□□□□ -2.27
VTNP04004 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
VTNP04004 RNA5SP127-201ENST00000411051 133 ntBASIC0.9□□□□□ -2.27
VTNP04004 RNU7-45P-201ENST00000459460 63 ntBASIC0.9□□□□□ -2.27
VTNP04004 RNU7-80P-201ENST00000459562 61 ntBASIC0.9□□□□□ -2.27
VTNP04004 RNU11-2P-201ENST00000516898 142 ntBASIC0.9□□□□□ -2.27
VTNP04004 MIR5197-201ENST00000583721 112 ntBASIC0.9□□□□□ -2.27
VTNP04004 AC131055.1-201ENST00000584626 316 ntBASIC0.9□□□□□ -2.27
VTNP04004 AC004792.1-201ENST00000614523 137 ntBASIC0.9□□□□□ -2.27
VTNP04004 SNORA1.1-201ENST00000364671 133 ntBASIC0.89□□□□□ -2.27
VTNP04004 RNU6-1318P-201ENST00000365389 103 ntBASIC0.89□□□□□ -2.27
VTNP04004 RNU6-768P-201ENST00000384683 107 ntBASIC0.89□□□□□ -2.27
VTNP04004 SNORD38B-201ENST00000384690 67 ntBASIC0.89□□□□□ -2.27
VTNP04004 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
VTNP04004 RNU6-1190P-201ENST00000410811 104 ntBASIC0.89□□□□□ -2.27
VTNP04004 RNU7-73P-201ENST00000458743 63 ntBASIC0.89□□□□□ -2.27
VTNP04004 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
VTNP04004 Y_RNA.662-201ENST00000516028 97 ntBASIC0.89□□□□□ -2.27
VTNP04004 AP000753.3-201ENST00000604083 169 ntBASIC0.89□□□□□ -2.27
VTNP04004 RNU6-94P-201ENST00000607728 107 ntBASIC0.89□□□□□ -2.27
VTNP04004 SNORD38B-202ENST00000625943 69 ntBASIC0.89□□□□□ -2.27
VTNP04004 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VTNP04004 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
VTNP04004 Y_RNA.337-201ENST00000365312 102 ntBASIC0.88□□□□□ -2.27
VTNP04004 Y_RNA.393-201ENST00000383936 102 ntBASIC0.88□□□□□ -2.27
VTNP04004 RNU6-125P-201ENST00000384505 107 ntBASIC0.88□□□□□ -2.27
VTNP04004 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
VTNP04004 SNORD37.2-201ENST00000391075 66 ntBASIC0.88□□□□□ -2.27
VTNP04004 MIR548I3-201ENST00000408378 149 ntBASIC0.88□□□□□ -2.27
VTNP04004 RNU6-994P-201ENST00000410507 111 ntBASIC0.88□□□□□ -2.27
VTNP04004 RNU6-1149P-201ENST00000516810 97 ntBASIC0.88□□□□□ -2.27
VTNP04004 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
VTNP04004 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.88□□□□□ -2.27
VTNP04004 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
VTNP04004 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
VTNP04004 MIR6844-201ENST00000637122 62 ntBASIC0.88□□□□□ -2.27
VTNP04004 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
VTNP04004 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
VTNP04004 RNU6-1082P-201ENST00000364574 107 ntBASIC0.87□□□□□ -2.27
VTNP04004 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
VTNP04004 RNU1-133P-201ENST00000364867 167 ntBASIC0.87□□□□□ -2.27
VTNP04004 Y_RNA.454-201ENST00000384224 113 ntBASIC0.87□□□□□ -2.27
VTNP04004 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
VTNP04004 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
VTNP04004 RNU7-120P-201ENST00000459334 63 ntBASIC0.87□□□□□ -2.27
VTNP04004 RNU6-182P-201ENST00000516970 105 ntBASIC0.87□□□□□ -2.27
VTNP04004 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.87□□□□□ -2.27
VTNP04004 MIR8055-201ENST00000610739 97 ntBASIC0.87□□□□□ -2.27
VTNP04004 AC091932.4-201ENST00000623386 200 ntBASIC0.87□□□□□ -2.27
VTNP04004 RNU6-682P-201ENST00000363843 106 ntBASIC0.86□□□□□ -2.27
VTNP04004 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
VTNP04004 MIR624-201ENST00000385217 97 ntBASIC0.86□□□□□ -2.27
VTNP04004 RNU6-239P-201ENST00000390990 99 ntBASIC0.86□□□□□ -2.27
VTNP04004 SNORD111-201ENST00000408139 94 ntBASIC0.86□□□□□ -2.27
VTNP04004 RNU6-588P-201ENST00000410281 105 ntBASIC0.86□□□□□ -2.27
VTNP04004 AC244023.1-201ENST00000426884 112 ntBASIC0.86□□□□□ -2.27
VTNP04004 AC074198.2-201ENST00000508153 258 ntBASIC0.86□□□□□ -2.27
VTNP04004 Y_RNA.700-201ENST00000516806 100 ntBASIC0.86□□□□□ -2.27
VTNP04004 MIR4714-201ENST00000580728 77 ntBASIC0.86□□□□□ -2.27
VTNP04004 AC242498.1-201ENST00000604134 111 ntBASIC0.86□□□□□ -2.27
VTNP04004 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
VTNP04004 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.86□□□□□ -2.27
VTNP04004 MTND5P32-201ENST00000560711 1802 ntBASIC0.86□□□□□ -2.27
VTNP04004 Y_RNA.240-201ENST00000364469 95 ntBASIC0.85□□□□□ -2.27
VTNP04004 RNU6-818P-201ENST00000364837 108 ntBASIC0.85□□□□□ -2.27
VTNP04004 RNU6-597P-201ENST00000365620 102 ntBASIC0.85□□□□□ -2.27
VTNP04004 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
VTNP04004 AC067940.1-201ENST00000458411 300 ntBASIC0.85□□□□□ -2.27
VTNP04004 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
VTNP04004 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.85□□□□□ -2.27
VTNP04004 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.85□□□□□ -2.27
VTNP04004 RNU4-84P-201ENST00000364200 139 ntBASIC0.84□□□□□ -2.27
VTNP04004 Y_RNA.785-201ENST00000384290 109 ntBASIC0.84□□□□□ -2.27
VTNP04004 SNORA20-201ENST00000384662 132 ntBASIC0.84□□□□□ -2.27
VTNP04004 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
VTNP04004 RNU6-602P-201ENST00000411155 105 ntBASIC0.84□□□□□ -2.27
VTNP04004 RNU5E-9P-201ENST00000411164 104 ntBASIC0.84□□□□□ -2.27
VTNP04004 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
VTNP04004 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
VTNP04004 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
VTNP04004 MIR4264-201ENST00000583520 66 ntBASIC0.84□□□□□ -2.27
VTNP04004 AC104465.1-201ENST00000611365 139 ntBASIC0.84□□□□□ -2.27
VTNP04004 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
VTNP04004 MIR6717-201ENST00000622747 73 ntBASIC0.84□□□□□ -2.27
VTNP04004 MIR3658-201ENST00000636291 56 ntBASIC0.84□□□□□ -2.27
VTNP04004 Z97988.1-201ENST00000637697 135 ntBASIC0.84□□□□□ -2.27
VTNP04004 Y_RNA.270-201ENST00000364693 104 ntBASIC0.83□□□□□ -2.28
VTNP04004 RNU4-16P-201ENST00000364737 141 ntBASIC0.83□□□□□ -2.28
VTNP04004 RNU6-1237P-201ENST00000384777 107 ntBASIC0.83□□□□□ -2.28
VTNP04004 RNA5SP261-201ENST00000410536 106 ntBASIC0.83□□□□□ -2.28
VTNP04004 SNORD83.1-201ENST00000411362 77 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms