Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 RNY3P5-201ENST00000384127 102 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 MIR1252-201ENST00000408861 65 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.08□□□□□ -2.42
MT-ND3P03897 RNU6-765P-201ENST00000516916 99 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 uc_338.22-201ENST00000622722 187 ntBASIC-0.08□□□□□ -2.42
MT-ND3P03897 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 SNORA26.6-201ENST00000391256 115 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 RNU6-101P-201ENST00000410323 104 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 SUMO1P3-201ENST00000439961 304 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 MTND4P19-201ENST00000446659 478 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.09□□□□□ -2.42
MT-ND3P03897 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 SNORA40.15-201ENST00000516884 107 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 MIR4752-201ENST00000579672 72 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 MIR6082-201ENST00000613604 109 ntBASIC-0.09□□□□□ -2.42
MT-ND3P03897 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 RNY3P1-201ENST00000365085 102 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 RNU6-662P-201ENST00000384253 104 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 MIR610-201ENST00000385139 96 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
MT-ND3P03897 RNU6-127P-201ENST00000390897 107 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 RNU7-45P-201ENST00000459460 63 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 snoU18.1-201ENST00000629629 71 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 MIR6828-201ENST00000636181 60 ntBASIC-0.1□□□□□ -2.43
MT-ND3P03897 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 RNU6-403P-201ENST00000363163 104 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 RNU6-823P-201ENST00000391042 103 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 AL008718.3-201ENST00000610217 321 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 AC091304.10-201ENST00000641554 121 ntBASIC-0.11□□□□□ -2.43
MT-ND3P03897 RNU4-73P-201ENST00000363164 141 ntBASIC-0.12□□□□□ -2.43
MT-ND3P03897 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.12□□□□□ -2.43
MT-ND3P03897 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
MT-ND3P03897 AL133255.1-201ENST00000606374 441 ntBASIC-0.12□□□□□ -2.43
MT-ND3P03897 MIR499B-201ENST00000636498 73 ntBASIC-0.12□□□□□ -2.43
MT-ND3P03897 UBE2WP1-201ENST00000362030 340 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 SNORA2A-201ENST00000383885 135 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 SNORA20-201ENST00000384662 132 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 MIR626-201ENST00000385032 94 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 MTND5P20-201ENST00000448677 143 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 MTND3P22-201ENST00000510932 243 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 SNORA31.14-201ENST00000516728 116 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 AC097639.2-201ENST00000603159 172 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.13□□□□□ -2.43
MT-ND3P03897 RNU4-10P-201ENST00000364383 140 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 RNU6-484P-201ENST00000384016 107 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 MIR760-201ENST00000390220 80 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 MIR548H2-201ENST00000408874 88 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 MIR6759-201ENST00000638110 65 ntBASIC-0.14□□□□□ -2.43
MT-ND3P03897 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 MIR145-201ENST00000384967 88 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 MT-TD-201ENST00000387419 68 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 U8.15-201ENST00000390947 134 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 RNA5SP47-201ENST00000517230 109 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.15□□□□□ -2.43
MT-ND3P03897 MIR4639-201ENST00000584938 69 ntBASIC-0.15□□□□□ -2.43
MT-ND3P03897 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.16□□□□□ -2.44
MT-ND3P03897 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.16□□□□□ -2.44
MT-ND3P03897 RNA5SP395-201ENST00000516567 118 ntBASIC-0.16□□□□□ -2.44
MT-ND3P03897 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.16□□□□□ -2.44
MT-ND3P03897 AC141846.1-201ENST00000568348 142 ntBASIC-0.16□□□□□ -2.44
MT-ND3P03897 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 RNU6V-201ENST00000384105 107 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 RNU6-121P-201ENST00000410525 99 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 MTND5P34-201ENST00000568888 325 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 MIR4491-201ENST00000581087 68 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 MIR4795-201ENST00000584182 89 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 MIR4743-201ENST00000584576 69 ntBASIC-0.17□□□□□ -2.44
MT-ND3P03897 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.18□□□□□ -2.44
MT-ND3P03897 RNU6-770P-201ENST00000363929 105 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms