Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.71□□□□□ -2.3
PDGFBP01127 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 AC087499.4-201ENST00000448505 178 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNU2-11P-201ENST00000459191 187 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 snoU13.16-201ENST00000459350 104 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNU2-13P-201ENST00000515909 113 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 MIR5688-201ENST00000580619 83 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
PDGFBP01127 MIR1-1-201ENST00000362147 71 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 MIR302B-201ENST00000362188 73 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 Y_RNA.66-201ENST00000362862 102 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 Y_RNA.294-201ENST00000364916 102 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 RNU6-728P-201ENST00000365375 104 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 RNU6-1189P-201ENST00000383958 107 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 RPS29P24-201ENST00000486345 171 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.7□□□□□ -2.3
PDGFBP01127 AC113410.1-201ENST00000505029 247 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 Y_RNA.797-201ENST00000515977 94 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 Y_RNA.680-201ENST00000516441 93 ntBASIC0.7□□□□□ -2.3
PDGFBP01127 RNU6-934P-201ENST00000365154 107 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 Y_RNA.351-201ENST00000365436 96 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 Y_RNA.412-201ENST00000384001 104 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 RNU6-613P-201ENST00000410412 108 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 AC244023.1-201ENST00000426884 112 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 MTND1P19-201ENST00000511780 315 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 MIR4771-2-201ENST00000577758 74 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 MIR4503-201ENST00000582187 83 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 MIR4771-1-201ENST00000582617 74 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 AC242498.1-201ENST00000604134 111 ntBASIC0.69□□□□□ -2.3
PDGFBP01127 AL596211.1-201ENST00000569873 2277 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 Y_RNA.60-201ENST00000362831 98 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 Y_RNA.182-201ENST00000363880 111 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 SNORA1.1-201ENST00000364671 133 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 RNU6-196P-201ENST00000384315 107 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 Y_RNA.539-201ENST00000384635 107 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 SNORD38B-201ENST00000384690 67 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 RNU6-1237P-201ENST00000384777 107 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 SNORD77.3-201ENST00000391113 65 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 AL078595.1-201ENST00000404458 226 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 MTND3P2-201ENST00000438452 342 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 RNU7-62P-201ENST00000458856 62 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 RNU7-53P-201ENST00000516705 60 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 MIR4744-201ENST00000581563 82 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 AC011921.3-201ENST00000605540 361 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 AC062037.2-201ENST00000610137 73 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 SNORD38B-202ENST00000625943 69 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 MIR376A2-201ENST00000636782 80 ntBASIC0.68□□□□□ -2.3
PDGFBP01127 Y_RNA.350-201ENST00000365409 98 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 RNY3P5-201ENST00000384127 102 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 Y_RNA.626-201ENST00000411288 95 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 RNU6-977P-201ENST00000516411 103 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 RNA5SP153-201ENST00000516498 76 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 RNU6-126P-201ENST00000516685 103 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 uc_338.6-201ENST00000613544 171 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 U4.1-201ENST00000620349 87 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PDGFBP01127 AC010332.2-201ENST00000613083 1904 ntBASIC0.67□□□□□ -2.3
PDGFBP01127 Y_RNA.168-201ENST00000363740 102 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 Y_RNA.280-201ENST00000364765 112 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 SNORA20.1-201ENST00000364790 130 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 Y_RNA.307-201ENST00000365022 117 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 RNY4P28-201ENST00000365281 93 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 Y_RNA.556-201ENST00000384677 113 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 SNORD12C-201ENST00000386307 89 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 MIR548I3-201ENST00000408378 149 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 RNU6-111P-201ENST00000517179 105 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 MIR6086-201ENST00000638065 55 ntBASIC0.66□□□□□ -2.3
PDGFBP01127 Y_RNA.274-201ENST00000364714 101 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 RNU6-1336P-201ENST00000383886 109 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 SNORA24-201ENST00000384096 131 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 Y_RNA.447-201ENST00000384184 113 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 MIR520F-201ENST00000384824 87 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 MIR588-201ENST00000384900 83 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PDGFBP01127 RNU6-578P-201ENST00000390980 103 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 AC092628.1-201ENST00000436250 252 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 Y_RNA.668-201ENST00000516233 93 ntBASIC0.65□□□□□ -2.31
PDGFBP01127 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.65□□□□□ -2.31
PDGFBP01127 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PDGFBP01127 RNU6-702P-201ENST00000364982 107 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 RNU4-70P-201ENST00000384579 139 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 Y_RNA.562-201ENST00000384695 113 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 Y_RNA.571-201ENST00000384753 98 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.64□□□□□ -2.31
PDGFBP01127 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 RNU7-96P-201ENST00000459535 64 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 311.4 ms