Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-654P-201ENST00000364373 107 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.251-201ENST00000364551 99 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.400-201ENST00000383963 111 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.508-201ENST00000384502 114 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 SNORA20-201ENST00000384662 132 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AL392103.1-201ENST00000447000 198 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU7-197P-201ENST00000458836 62 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU7-80P-201ENST00000459562 61 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU7-200P-201ENST00000516105 62 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNA5SP236-201ENST00000516169 116 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 Y_RNA.686-201ENST00000516548 134 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
CLPTM1O96005 PRELID3BP2-201ENST00000605362 201 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
CLPTM1O96005 RNU6-774P-201ENST00000363238 107 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 Y_RNA.215-201ENST00000364204 112 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 MIR569-201ENST00000385228 96 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 MIR513C-201ENST00000401352 84 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 RNA5SP95-201ENST00000410319 137 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 RNU6-346P-201ENST00000516288 111 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 MIR8070-201ENST00000616510 88 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 MIR6516-201ENST00000630554 81 ntBASIC1.02□□□□□ -2.25
CLPTM1O96005 Y_RNA.454-201ENST00000384224 113 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 RNU6-426P-201ENST00000516464 97 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 SNORA70.22-201ENST00000517160 124 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 MIR548X2-201ENST00000579776 100 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.01□□□□□ -2.25
CLPTM1O96005 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
CLPTM1O96005 SNORA1.1-201ENST00000364671 133 ntBASIC1□□□□□ -2.25
CLPTM1O96005 RNU6-1062P-201ENST00000383908 107 ntBASIC1□□□□□ -2.25
CLPTM1O96005 Y_RNA.420-201ENST00000384043 110 ntBASIC1□□□□□ -2.25
CLPTM1O96005 Y_RNA.506-201ENST00000384494 102 ntBASIC1□□□□□ -2.25
CLPTM1O96005 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
CLPTM1O96005 RNU5E-3P-201ENST00000515913 68 ntBASIC1□□□□□ -2.25
CLPTM1O96005 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
CLPTM1O96005 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CLPTM1O96005 AL078603.1-201ENST00000603824 313 ntBASIC1□□□□□ -2.25
CLPTM1O96005 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
CLPTM1O96005 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CLPTM1O96005 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.99□□□□□ -2.25
CLPTM1O96005 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.99□□□□□ -2.25
CLPTM1O96005 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 RNU6-396P-201ENST00000365369 105 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 Y_RNA.488-201ENST00000384403 102 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 RNU6-205P-201ENST00000390858 107 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.99□□□□□ -2.25
CLPTM1O96005 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 Y_RNA.690-201ENST00000516603 95 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 MIR2115-201ENST00000516657 100 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 MIR8055-201ENST00000610739 97 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 Z97988.1-201ENST00000637697 135 ntBASIC0.99□□□□□ -2.25
CLPTM1O96005 AC008163.1-202ENST00000636004 2889 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 Y_RNA.120-201ENST00000363304 110 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNU6-309P-201ENST00000364573 106 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNU6-915P-201ENST00000364943 103 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 Y_RNA.355-201ENST00000365462 98 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 SNORD18B-201ENST00000365659 72 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNY1P6-201ENST00000384193 109 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 SNORA80D-201ENST00000384488 135 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNU6-602P-201ENST00000411155 105 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 Y_RNA.651-201ENST00000459380 103 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 snoU13.18-201ENST00000459483 104 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CLPTM1O96005 MIR3133-201ENST00000583157 78 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 MIR6717-201ENST00000622747 73 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 AC021613.1-201ENST00000623880 111 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
CLPTM1O96005 Y_RNA.116-201ENST00000363292 103 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 RNU6-690P-201ENST00000365242 106 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CLPTM1O96005 AC063976.4-201ENST00000421971 163 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 MTATP6P21-201ENST00000440681 189 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 RNU6-240P-201ENST00000516098 97 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.97□□□□□ -2.25
CLPTM1O96005 MIR6734-201ENST00000621166 68 ntBASIC0.97□□□□□ -2.25
CLPTM1O96005 RNU6-349P-201ENST00000362402 107 ntBASIC0.96□□□□□ -2.26
CLPTM1O96005 SNORA2B-201ENST00000384583 137 ntBASIC0.96□□□□□ -2.26
CLPTM1O96005 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
CLPTM1O96005 AC244023.1-201ENST00000426884 112 ntBASIC0.96□□□□□ -2.26
CLPTM1O96005 RNU11-2P-201ENST00000516898 142 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms