Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR302B-201ENST00000362188 73 ntBASIC0.81□□□□□ -2.28
RTN3O95197 MIR342-201ENST00000362212 99 ntBASIC0.81□□□□□ -2.28
RTN3O95197 Y_RNA.308-201ENST00000365043 101 ntBASIC0.81□□□□□ -2.28
RTN3O95197 RNU6-1292P-201ENST00000383856 107 ntBASIC0.81□□□□□ -2.28
RTN3O95197 SNORD58.1-201ENST00000391313 66 ntBASIC0.81□□□□□ -2.28
RTN3O95197 RNU6-602P-201ENST00000411155 105 ntBASIC0.81□□□□□ -2.28
RTN3O95197 AL118496.2-201ENST00000448300 230 ntBASIC0.81□□□□□ -2.28
RTN3O95197 RNU7-80P-201ENST00000459562 61 ntBASIC0.81□□□□□ -2.28
RTN3O95197 MTND1P19-201ENST00000511780 315 ntBASIC0.81□□□□□ -2.28
RTN3O95197 MIR5197-201ENST00000583721 112 ntBASIC0.81□□□□□ -2.28
RTN3O95197 AL365205.2-201ENST00000594586 68 ntBASIC0.81□□□□□ -2.28
RTN3O95197 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
RTN3O95197 AC062037.2-201ENST00000610137 73 ntBASIC0.81□□□□□ -2.28
RTN3O95197 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RTN3O95197 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
RTN3O95197 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
RTN3O95197 Y_RNA.65-201ENST00000362846 100 ntBASIC0.8□□□□□ -2.28
RTN3O95197 Y_RNA.121-201ENST00000363309 113 ntBASIC0.8□□□□□ -2.28
RTN3O95197 Y_RNA.351-201ENST00000365436 96 ntBASIC0.8□□□□□ -2.28
RTN3O95197 RNU6-578P-201ENST00000390980 103 ntBASIC0.8□□□□□ -2.28
RTN3O95197 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.8□□□□□ -2.28
RTN3O95197 RNA5SP261-201ENST00000410536 106 ntBASIC0.8□□□□□ -2.28
RTN3O95197 Y_RNA.618-201ENST00000410949 107 ntBASIC0.8□□□□□ -2.28
RTN3O95197 SNORD83.1-201ENST00000411362 77 ntBASIC0.8□□□□□ -2.28
RTN3O95197 RNY3P16-201ENST00000516338 101 ntBASIC0.8□□□□□ -2.28
RTN3O95197 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
RTN3O95197 MIR4771-2-201ENST00000577758 74 ntBASIC0.8□□□□□ -2.28
RTN3O95197 MIR4771-1-201ENST00000582617 74 ntBASIC0.8□□□□□ -2.28
RTN3O95197 Y_RNA.115-201ENST00000363272 98 ntBASIC0.79□□□□□ -2.28
RTN3O95197 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
RTN3O95197 Y_RNA.454-201ENST00000384224 113 ntBASIC0.79□□□□□ -2.28
RTN3O95197 Y_RNA.477-201ENST00000384352 108 ntBASIC0.79□□□□□ -2.28
RTN3O95197 Y_RNA.539-201ENST00000384635 107 ntBASIC0.79□□□□□ -2.28
RTN3O95197 RNU1-119P-201ENST00000391122 165 ntBASIC0.79□□□□□ -2.28
RTN3O95197 RNU6-493P-201ENST00000391321 108 ntBASIC0.79□□□□□ -2.28
RTN3O95197 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
RTN3O95197 RNU6-977P-201ENST00000516411 103 ntBASIC0.79□□□□□ -2.28
RTN3O95197 SNORD116-25-201ENST00000516517 92 ntBASIC0.79□□□□□ -2.28
RTN3O95197 RNU2-4P-201ENST00000606190 192 ntBASIC0.79□□□□□ -2.28
RTN3O95197 U4.1-201ENST00000620349 87 ntBASIC0.79□□□□□ -2.28
RTN3O95197 AC023934.1-201ENST00000574529 2389 ntBASIC0.79□□□□□ -2.28
RTN3O95197 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
RTN3O95197 Y_RNA.251-201ENST00000364551 99 ntBASIC0.78□□□□□ -2.28
RTN3O95197 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
RTN3O95197 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
RTN3O95197 RNU6-1190P-201ENST00000410811 104 ntBASIC0.78□□□□□ -2.28
RTN3O95197 AC244098.3-201ENST00000424803 96 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MTND3P2-201ENST00000438452 342 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MIR18B-201ENST00000454574 71 ntBASIC0.78□□□□□ -2.28
RTN3O95197 Y_RNA.797-201ENST00000515977 94 ntBASIC0.78□□□□□ -2.28
RTN3O95197 RNU4-71P-201ENST00000516258 113 ntBASIC0.78□□□□□ -2.28
RTN3O95197 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MIR6740-201ENST00000618268 113 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MIR376A2-201ENST00000636782 80 ntBASIC0.78□□□□□ -2.28
RTN3O95197 MIR520F-201ENST00000384824 87 ntBASIC0.77□□□□□ -2.29
RTN3O95197 MIR588-201ENST00000384900 83 ntBASIC0.77□□□□□ -2.29
RTN3O95197 Y_RNA.626-201ENST00000411288 95 ntBASIC0.77□□□□□ -2.29
RTN3O95197 snoU13.2-201ENST00000459201 104 ntBASIC0.77□□□□□ -2.29
RTN3O95197 COX6CP6-201ENST00000490840 228 ntBASIC0.77□□□□□ -2.29
RTN3O95197 MIR378D2-201ENST00000580636 98 ntBASIC0.77□□□□□ -2.29
RTN3O95197 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RTN3O95197 RNU6-1165P-201ENST00000410119 107 ntBASIC0.76□□□□□ -2.29
RTN3O95197 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RTN3O95197 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
RTN3O95197 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
RTN3O95197 MIR3128-201ENST00000581957 66 ntBASIC0.76□□□□□ -2.29
RTN3O95197 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.76□□□□□ -2.29
RTN3O95197 MIR6513-201ENST00000621188 64 ntBASIC0.76□□□□□ -2.29
RTN3O95197 AC010332.2-201ENST00000613083 1904 ntBASIC0.76□□□□□ -2.29
RTN3O95197 Y_RNA.68-201ENST00000362881 102 ntBASIC0.75□□□□□ -2.29
RTN3O95197 RNU6-923P-201ENST00000364753 107 ntBASIC0.75□□□□□ -2.29
RTN3O95197 RNU6-702P-201ENST00000364982 107 ntBASIC0.75□□□□□ -2.29
RTN3O95197 RNU6-196P-201ENST00000384315 107 ntBASIC0.75□□□□□ -2.29
RTN3O95197 Y_RNA.571-201ENST00000384753 98 ntBASIC0.75□□□□□ -2.29
RTN3O95197 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.75□□□□□ -2.29
RTN3O95197 RNU6-1023P-201ENST00000516137 106 ntBASIC0.75□□□□□ -2.29
RTN3O95197 RNA5SP330-201ENST00000517096 96 ntBASIC0.75□□□□□ -2.29
RTN3O95197 MIR4676-201ENST00000583078 72 ntBASIC0.75□□□□□ -2.29
RTN3O95197 MIR6717-201ENST00000622747 73 ntBASIC0.75□□□□□ -2.29
RTN3O95197 AC091932.4-201ENST00000623386 200 ntBASIC0.75□□□□□ -2.29
RTN3O95197 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
RTN3O95197 SNORD114-23-201ENST00000363536 72 ntBASIC0.74□□□□□ -2.29
RTN3O95197 RNU6-978P-201ENST00000364371 103 ntBASIC0.74□□□□□ -2.29
RTN3O95197 RNU4-70P-201ENST00000384579 139 ntBASIC0.74□□□□□ -2.29
RTN3O95197 MIR520H-201ENST00000385126 88 ntBASIC0.74□□□□□ -2.29
RTN3O95197 SNORA26.6-201ENST00000391256 115 ntBASIC0.74□□□□□ -2.29
RTN3O95197 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
RTN3O95197 AC015818.7-201ENST00000428754 109 ntBASIC0.74□□□□□ -2.29
RTN3O95197 AC087499.7-201ENST00000441958 109 ntBASIC0.74□□□□□ -2.29
RTN3O95197 Y_RNA.681-201ENST00000516445 113 ntBASIC0.74□□□□□ -2.29
RTN3O95197 RNU7-70P-201ENST00000516941 66 ntBASIC0.74□□□□□ -2.29
RTN3O95197 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
RTN3O95197 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
RTN3O95197 Y_RNA.182-201ENST00000363880 111 ntBASIC0.73□□□□□ -2.29
RTN3O95197 Y_RNA.193-201ENST00000363979 102 ntBASIC0.73□□□□□ -2.29
RTN3O95197 SNORA20.1-201ENST00000364790 130 ntBASIC0.73□□□□□ -2.29
RTN3O95197 RNU6-643P-201ENST00000384018 107 ntBASIC0.73□□□□□ -2.29
RTN3O95197 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
RTN3O95197 MIR573-201ENST00000384964 99 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms