Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU7-70P-201ENST00000516941 66 ntBASIC1.15□□□□□ -2.23
PRKNO60260 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
PRKNO60260 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
PRKNO60260 AL596211.1-201ENST00000569873 2277 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNU6-508P-201ENST00000363231 103 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNA5SP48-201ENST00000363969 126 ntBASIC1.14□□□□□ -2.23
PRKNO60260 Y_RNA.218-201ENST00000364218 104 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNU6-959P-201ENST00000384671 107 ntBASIC1.14□□□□□ -2.23
PRKNO60260 MIR489-201ENST00000384923 84 ntBASIC1.14□□□□□ -2.23
PRKNO60260 AL603914.1-201ENST00000401964 204 ntBASIC1.14□□□□□ -2.23
PRKNO60260 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
PRKNO60260 AL035398.1-201ENST00000430869 322 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNU2-11P-201ENST00000459191 187 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNU7-96P-201ENST00000459535 64 ntBASIC1.14□□□□□ -2.23
PRKNO60260 AC048334.1-201ENST00000477975 159 ntBASIC1.14□□□□□ -2.23
PRKNO60260 RNU6-998P-201ENST00000515894 101 ntBASIC1.14□□□□□ -2.23
PRKNO60260 Y_RNA.690-201ENST00000516603 95 ntBASIC1.14□□□□□ -2.23
PRKNO60260 AC011603.4-201ENST00000611325 277 ntBASIC1.14□□□□□ -2.23
PRKNO60260 TUG1_4.1-201ENST00000619464 181 ntBASIC1.14□□□□□ -2.23
PRKNO60260 AC091932.4-201ENST00000623386 200 ntBASIC1.14□□□□□ -2.23
PRKNO60260 MIR302B-201ENST00000362188 73 ntBASIC1.13□□□□□ -2.23
PRKNO60260 Y_RNA.280-201ENST00000364765 112 ntBASIC1.13□□□□□ -2.23
PRKNO60260 Y_RNA.294-201ENST00000364916 102 ntBASIC1.13□□□□□ -2.23
PRKNO60260 SNORA24-201ENST00000384096 131 ntBASIC1.13□□□□□ -2.23
PRKNO60260 MTATP6P21-201ENST00000440681 189 ntBASIC1.13□□□□□ -2.23
PRKNO60260 Y_RNA.651-201ENST00000459380 103 ntBASIC1.13□□□□□ -2.23
PRKNO60260 snoU13.18-201ENST00000459483 104 ntBASIC1.13□□□□□ -2.23
PRKNO60260 RNU7-80P-201ENST00000459562 61 ntBASIC1.13□□□□□ -2.23
PRKNO60260 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
PRKNO60260 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
PRKNO60260 MIR548AO-201ENST00000579992 96 ntBASIC1.13□□□□□ -2.23
PRKNO60260 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
PRKNO60260 MIR8065-201ENST00000620577 100 ntBASIC1.13□□□□□ -2.23
PRKNO60260 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.13□□□□□ -2.23
PRKNO60260 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PRKNO60260 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
PRKNO60260 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
PRKNO60260 SNORD18B-201ENST00000365659 72 ntBASIC1.12□□□□□ -2.23
PRKNO60260 MIR539-201ENST00000365690 78 ntBASIC1.12□□□□□ -2.23
PRKNO60260 RNU6-913P-201ENST00000390913 95 ntBASIC1.12□□□□□ -2.23
PRKNO60260 AL606753.1-201ENST00000427435 87 ntBASIC1.12□□□□□ -2.23
PRKNO60260 RNU6-1211P-201ENST00000459179 105 ntBASIC1.12□□□□□ -2.23
PRKNO60260 AL133373.1-201ENST00000497098 94 ntBASIC1.12□□□□□ -2.23
PRKNO60260 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
PRKNO60260 Y_RNA.692-201ENST00000516627 105 ntBASIC1.12□□□□□ -2.23
PRKNO60260 Y_RNA.757-201ENST00000578934 114 ntBASIC1.12□□□□□ -2.23
PRKNO60260 MIR3121-201ENST00000579680 77 ntBASIC1.12□□□□□ -2.23
PRKNO60260 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
PRKNO60260 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.12□□□□□ -2.23
PRKNO60260 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
PRKNO60260 MIR103A2-201ENST00000362154 78 ntBASIC1.11□□□□□ -2.23
PRKNO60260 RNU1-133P-201ENST00000364867 167 ntBASIC1.11□□□□□ -2.23
PRKNO60260 Y_RNA.454-201ENST00000384224 113 ntBASIC1.11□□□□□ -2.23
PRKNO60260 AC245047.7-201ENST00000440265 293 ntBASIC1.11□□□□□ -2.23
PRKNO60260 snoU13.16-201ENST00000459350 104 ntBASIC1.11□□□□□ -2.23
PRKNO60260 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.11□□□□□ -2.23
PRKNO60260 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
PRKNO60260 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
PRKNO60260 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU6-1117P-201ENST00000384525 104 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU6-1190P-201ENST00000410811 104 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU6-1054P-201ENST00000411293 104 ntBASIC1.1□□□□□ -2.23
PRKNO60260 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU7-73P-201ENST00000458743 63 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU7-45P-201ENST00000459460 63 ntBASIC1.1□□□□□ -2.23
PRKNO60260 RNU6-1234P-201ENST00000516877 103 ntBASIC1.1□□□□□ -2.23
PRKNO60260 Y_RNA.71-201ENST00000362892 104 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNA5SP264-201ENST00000363115 107 ntBASIC1.09□□□□□ -2.23
PRKNO60260 Y_RNA.114-201ENST00000363265 113 ntBASIC1.09□□□□□ -2.23
PRKNO60260 SNORD116-14-201ENST00000383894 92 ntBASIC1.09□□□□□ -2.23
PRKNO60260 SNORD116-17-201ENST00000383929 92 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNU6-80P-201ENST00000384195 107 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNU6-22P-201ENST00000384355 107 ntBASIC1.09□□□□□ -2.23
PRKNO60260 SNORD116-15-201ENST00000384445 92 ntBASIC1.09□□□□□ -2.23
PRKNO60260 SNORD116-19-201ENST00000384729 92 ntBASIC1.09□□□□□ -2.23
PRKNO60260 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNU6-910P-201ENST00000390844 107 ntBASIC1.09□□□□□ -2.23
PRKNO60260 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNU5E-3P-201ENST00000515913 68 ntBASIC1.09□□□□□ -2.23
PRKNO60260 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
PRKNO60260 AC108081.1-201ENST00000604358 221 ntBASIC1.09□□□□□ -2.23
PRKNO60260 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNU6-235P-201ENST00000362644 107 ntBASIC1.08□□□□□ -2.24
PRKNO60260 Y_RNA.127-201ENST00000363386 109 ntBASIC1.08□□□□□ -2.24
PRKNO60260 SNORD114-27-201ENST00000363766 70 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNU4-16P-201ENST00000364737 141 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNY1P6-201ENST00000384193 109 ntBASIC1.08□□□□□ -2.24
PRKNO60260 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
PRKNO60260 AL158147.1-201ENST00000443970 75 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNU7-107P-201ENST00000459121 61 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
PRKNO60260 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
PRKNO60260 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
PRKNO60260 SNORA4-201ENST00000584302 138 ntBASIC1.08□□□□□ -2.24
PRKNO60260 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
PRKNO60260 AL365222.1-201ENST00000614661 98 ntBASIC1.08□□□□□ -2.24
PRKNO60260 RNU6-349P-201ENST00000362402 107 ntBASIC1.07□□□□□ -2.24
PRKNO60260 RNU6-647P-201ENST00000364243 107 ntBASIC1.07□□□□□ -2.24
PRKNO60260 SNORA1.1-201ENST00000364671 133 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms