Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-1020P-201ENST00000363684 107 ntBASIC0.85□□□□□ -2.27
SSX4O60224 RNU6-379P-201ENST00000363813 104 ntBASIC0.85□□□□□ -2.27
SSX4O60224 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
SSX4O60224 Y_RNA.435-201ENST00000384095 112 ntBASIC0.85□□□□□ -2.27
SSX4O60224 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
SSX4O60224 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
SSX4O60224 snoU13.21-201ENST00000459368 105 ntBASIC0.85□□□□□ -2.27
SSX4O60224 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
SSX4O60224 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
SSX4O60224 MRPS18CP4-201ENST00000535821 231 ntBASIC0.85□□□□□ -2.27
SSX4O60224 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
SSX4O60224 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SSX4O60224 Y_RNA.274-201ENST00000364714 101 ntBASIC0.84□□□□□ -2.27
SSX4O60224 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
SSX4O60224 Y_RNA.354-201ENST00000365448 111 ntBASIC0.84□□□□□ -2.27
SSX4O60224 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.84□□□□□ -2.27
SSX4O60224 RNA5SP127-201ENST00000411051 133 ntBASIC0.84□□□□□ -2.27
SSX4O60224 RNU6-602P-201ENST00000411155 105 ntBASIC0.84□□□□□ -2.27
SSX4O60224 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
SSX4O60224 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.84□□□□□ -2.27
SSX4O60224 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
SSX4O60224 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
SSX4O60224 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
SSX4O60224 MIR598-201ENST00000384868 97 ntBASIC0.83□□□□□ -2.28
SSX4O60224 MT-TG-201ENST00000387429 68 ntBASIC0.83□□□□□ -2.28
SSX4O60224 RNU7-62P-201ENST00000458856 62 ntBASIC0.83□□□□□ -2.28
SSX4O60224 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
SSX4O60224 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.83□□□□□ -2.28
SSX4O60224 AC141273.2-201ENST00000618989 130 ntBASIC0.83□□□□□ -2.28
SSX4O60224 AC078938.1-201ENST00000620993 318 ntBASIC0.83□□□□□ -2.28
SSX4O60224 AC091932.4-201ENST00000623386 200 ntBASIC0.83□□□□□ -2.28
SSX4O60224 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SSX4O60224 Y_RNA.454-201ENST00000384224 113 ntBASIC0.82□□□□□ -2.28
SSX4O60224 MIR7-2-201ENST00000384970 110 ntBASIC0.82□□□□□ -2.28
SSX4O60224 MIR624-201ENST00000385217 97 ntBASIC0.82□□□□□ -2.28
SSX4O60224 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
SSX4O60224 RNA5SP480-201ENST00000516840 109 ntBASIC0.82□□□□□ -2.28
SSX4O60224 RNU6-388P-201ENST00000517012 105 ntBASIC0.82□□□□□ -2.28
SSX4O60224 RNU6-389P-201ENST00000517048 105 ntBASIC0.82□□□□□ -2.28
SSX4O60224 AC022559.1-201ENST00000520905 205 ntBASIC0.82□□□□□ -2.28
SSX4O60224 MIR4431-201ENST00000579990 94 ntBASIC0.82□□□□□ -2.28
SSX4O60224 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.82□□□□□ -2.28
SSX4O60224 AL596211.1-201ENST00000569873 2277 ntBASIC0.82□□□□□ -2.28
SSX4O60224 MIR1-1-201ENST00000362147 71 ntBASIC0.81□□□□□ -2.28
SSX4O60224 SNORA25.7-201ENST00000364375 127 ntBASIC0.81□□□□□ -2.28
SSX4O60224 Y_RNA.233-201ENST00000364407 101 ntBASIC0.81□□□□□ -2.28
SSX4O60224 Y_RNA.297-201ENST00000364950 91 ntBASIC0.81□□□□□ -2.28
SSX4O60224 RNU6-934P-201ENST00000365154 107 ntBASIC0.81□□□□□ -2.28
SSX4O60224 Y_RNA.515-201ENST00000384535 112 ntBASIC0.81□□□□□ -2.28
SSX4O60224 Y_RNA.521-201ENST00000384560 114 ntBASIC0.81□□□□□ -2.28
SSX4O60224 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
SSX4O60224 SNORA26.6-201ENST00000391256 115 ntBASIC0.81□□□□□ -2.28
SSX4O60224 SNORD83.1-201ENST00000411362 77 ntBASIC0.81□□□□□ -2.28
SSX4O60224 RNU6-1219P-201ENST00000516143 112 ntBASIC0.81□□□□□ -2.28
SSX4O60224 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.81□□□□□ -2.28
SSX4O60224 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
SSX4O60224 AL136317.1-201ENST00000612653 226 ntBASIC0.81□□□□□ -2.28
SSX4O60224 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
SSX4O60224 MIR6740-201ENST00000618268 113 ntBASIC0.81□□□□□ -2.28
SSX4O60224 MIR6717-201ENST00000622747 73 ntBASIC0.81□□□□□ -2.28
SSX4O60224 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU6-1336P-201ENST00000383886 109 ntBASIC0.8□□□□□ -2.28
SSX4O60224 Y_RNA.476-201ENST00000384347 108 ntBASIC0.8□□□□□ -2.28
SSX4O60224 Y_RNA.552-201ENST00000384665 112 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR588-201ENST00000384900 83 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
SSX4O60224 Y_RNA.644-201ENST00000459006 113 ntBASIC0.8□□□□□ -2.28
SSX4O60224 Y_RNA.674-201ENST00000516362 113 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU7-70P-201ENST00000516941 66 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
SSX4O60224 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
SSX4O60224 uc_338.6-201ENST00000613544 171 ntBASIC0.8□□□□□ -2.28
SSX4O60224 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
SSX4O60224 RNU6-597P-201ENST00000365620 102 ntBASIC0.79□□□□□ -2.28
SSX4O60224 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
SSX4O60224 SNORD12C-201ENST00000386307 89 ntBASIC0.79□□□□□ -2.28
SSX4O60224 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.79□□□□□ -2.28
SSX4O60224 RPS26P5-201ENST00000418544 335 ntBASIC0.79□□□□□ -2.28
SSX4O60224 AC015818.7-201ENST00000428754 109 ntBASIC0.79□□□□□ -2.28
SSX4O60224 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
SSX4O60224 AC087499.7-201ENST00000441958 109 ntBASIC0.79□□□□□ -2.28
SSX4O60224 RNU6-1149P-201ENST00000516810 97 ntBASIC0.79□□□□□ -2.28
SSX4O60224 SCARNA15-202ENST00000516881 127 ntBASIC0.79□□□□□ -2.28
SSX4O60224 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
SSX4O60224 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
SSX4O60224 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
SSX4O60224 PVT1_3.1-201ENST00000620853 95 ntBASIC0.79□□□□□ -2.28
SSX4O60224 RNU1-133P-201ENST00000364867 167 ntBASIC0.78□□□□□ -2.28
SSX4O60224 RNU6-1319P-201ENST00000390855 104 ntBASIC0.78□□□□□ -2.28
SSX4O60224 RNU6-747P-201ENST00000390928 104 ntBASIC0.78□□□□□ -2.28
SSX4O60224 RNU6-241P-201ENST00000391148 104 ntBASIC0.78□□□□□ -2.28
SSX4O60224 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
SSX4O60224 SNORD99-201ENST00000408612 74 ntBASIC0.78□□□□□ -2.28
SSX4O60224 RNA5SP261-201ENST00000410536 106 ntBASIC0.78□□□□□ -2.28
SSX4O60224 RNU6-177P-201ENST00000411257 104 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms