Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RNU6-735P-201ENST00000410612 107 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 RNA5SP127-201ENST00000411051 133 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 MIR548H5-201ENST00000580314 60 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 MIR4473-201ENST00000583731 91 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 AP001180.6-201ENST00000584918 159 ntBASIC-1.17□□□□□ -2.6
SSNA1O43805 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 Y_RNA.185-201ENST00000363894 100 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 SNORA8.3-201ENST00000384679 139 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.18□□□□□ -2.6
SSNA1O43805 MIR101-1-201ENST00000362265 75 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 RNU6-47P-201ENST00000383866 107 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 MIR5692C2-201ENST00000577959 77 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 MIR5197-201ENST00000583721 112 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 AC048344.4-201ENST00000619744 527 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 AC093726.3-201ENST00000637588 150 ntBASIC-1.19□□□□□ -2.6
SSNA1O43805 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 RNU6-455P-201ENST00000384681 107 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 MIR599-201ENST00000385069 95 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 RNU6-370P-201ENST00000411008 104 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 MTND1P34-201ENST00000438556 671 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 MTND4P17-201ENST00000470444 350 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 MRPS35P2-201ENST00000508242 191 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 AC245505.1-201ENST00000556398 224 ntBASIC-1.2□□□□□ -2.6
SSNA1O43805 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.21□□□□□ -2.6
SSNA1O43805 RNA5SP451-201ENST00000410588 110 ntBASIC-1.21□□□□□ -2.6
SSNA1O43805 AC099799.1-201ENST00000439809 192 ntBASIC-1.21□□□□□ -2.6
SSNA1O43805 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.21□□□□□ -2.6
SSNA1O43805 RNU7-35P-201ENST00000517174 62 ntBASIC-1.21□□□□□ -2.6
SSNA1O43805 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 RNU6-449P-201ENST00000383914 107 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 RNU4-70P-201ENST00000384579 139 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 MIR181B2-201ENST00000385004 89 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 SEPT14P8-201ENST00000508026 178 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.22□□□□□ -2.6
SSNA1O43805 C8orf59P2-201ENST00000603441 271 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 AL121655.1-201ENST00000605811 308 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 SNORD113-5-201ENST00000607261 78 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.22□□□□□ -2.6
SSNA1O43805 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 RNU6-484P-201ENST00000384016 107 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 MIR3920-201ENST00000581751 86 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 MIR4272-201ENST00000635924 64 ntBASIC-1.23□□□□□ -2.61
SSNA1O43805 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 RNU4-10P-201ENST00000364383 140 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 RNU1-141P-201ENST00000364623 158 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 RNU4-16P-201ENST00000364737 141 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 MIR559-201ENST00000385188 96 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 TRAJ51-201ENST00000504127 63 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 RNU7-10P-201ENST00000607194 63 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 AC098479.1-201ENST00000609225 154 ntBASIC-1.24□□□□□ -2.61
SSNA1O43805 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 Y_RNA.226-201ENST00000364337 114 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 MIR526A2-201ENST00000390198 65 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 AC097635.1-201ENST00000450678 155 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 MIR3129-201ENST00000581095 76 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 AC007485.1-201ENST00000616755 206 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 uc_338.10-201ENST00000621872 182 ntBASIC-1.25□□□□□ -2.61
SSNA1O43805 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 MIR635-201ENST00000384830 98 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 PMCHL1-202ENST00000423102 261 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 AL445193.1-201ENST00000441183 141 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-1.26□□□□□ -2.61
SSNA1O43805 RNU6-175P-201ENST00000516896 107 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 MIR5690-201ENST00000583739 73 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 AC097639.2-201ENST00000603159 172 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 AL109933.3-201ENST00000619095 188 ntBASIC-1.26□□□□□ -2.61
SSNA1O43805 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 RNU6-429P-201ENST00000384582 108 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 AL603914.1-201ENST00000401964 204 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.27□□□□□ -2.61
SSNA1O43805 RNU7-74P-201ENST00000459104 62 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 RNA5SP153-201ENST00000516498 76 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 RNU7-137P-201ENST00000516788 62 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 RNU6-699P-201ENST00000517081 110 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
SSNA1O43805 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.27□□□□□ -2.61
SSNA1O43805 Y_RNA.115-201ENST00000363272 98 ntBASIC-1.28□□□□□ -2.61
SSNA1O43805 SNORD114-29-201ENST00000364819 70 ntBASIC-1.28□□□□□ -2.61
SSNA1O43805 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms