Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 Y_RNA.778-201ENST00000620203 90 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 AC091932.4-201ENST00000623386 200 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 MTND5P32-201ENST00000560711 1802 ntBASIC1.4□□□□□ -2.19
PRPF3O43395 MIR377-201ENST00000362145 69 ntBASIC1.39□□□□□ -2.19
PRPF3O43395 RNU6-151P-201ENST00000364158 107 ntBASIC1.39□□□□□ -2.19
PRPF3O43395 RNU6-913P-201ENST00000390913 95 ntBASIC1.39□□□□□ -2.19
PRPF3O43395 MIR548I3-201ENST00000408378 149 ntBASIC1.39□□□□□ -2.19
PRPF3O43395 AL596211.1-201ENST00000569873 2277 ntBASIC1.39□□□□□ -2.19
PRPF3O43395 RNU1-133P-201ENST00000364867 167 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 Y_RNA.398-201ENST00000383952 99 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 RNU6-209P-201ENST00000384118 107 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 Y_RNA.464-201ENST00000384282 110 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 Y_RNA.497-201ENST00000384447 98 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 MT-TR-201ENST00000387439 65 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 SNORA75.2-201ENST00000391138 150 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 SNORA75.3-201ENST00000391231 150 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 RNA5SP404-201ENST00000517118 132 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 AP000753.3-201ENST00000604083 169 ntBASIC1.38□□□□□ -2.19
PRPF3O43395 Y_RNA.354-201ENST00000365448 111 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 SNORD111-201ENST00000408139 94 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 RNA5SP102-201ENST00000516865 106 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 AC112693.2-201ENST00000556538 232 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 MIR4264-201ENST00000583520 66 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 AC021753.1-201ENST00000635724 168 ntBASIC1.37□□□□□ -2.19
PRPF3O43395 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PRPF3O43395 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 MIR613-201ENST00000385248 95 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 MIR548I1-201ENST00000408810 149 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 MIR3152-201ENST00000579801 74 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 AL020996.3-201ENST00000606617 222 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 MIR6734-201ENST00000621166 68 ntBASIC1.36□□□□□ -2.19
PRPF3O43395 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 Y_RNA.584-201ENST00000391090 114 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 FABP5P4-201ENST00000437203 171 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 RNU6-893P-201ENST00000458841 100 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 AC012676.2-201ENST00000619258 186 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 Z97988.1-201ENST00000637697 135 ntBASIC1.35□□□□□ -2.19
PRPF3O43395 SNORD38B-201ENST00000384690 67 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 RNU6-1190P-201ENST00000410811 104 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 HMGN1P33-201ENST00000432945 451 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.34□□□□□ -2.19
PRPF3O43395 MTND5P41-201ENST00000517498 206 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.34□□□□□ -2.19
PRPF3O43395 AC091895.1-201ENST00000624494 256 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 SNORD38B-202ENST00000625943 69 ntBASIC1.34□□□□□ -2.19
PRPF3O43395 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
PRPF3O43395 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PRPF3O43395 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 Y_RNA.168-201ENST00000363740 102 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 RNY1P11-201ENST00000363759 113 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 Y_RNA.251-201ENST00000364551 99 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 SNORD113.3-201ENST00000364630 78 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 SNORD114-24-201ENST00000365029 72 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 AC090844.1-201ENST00000422019 156 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 RNU7-45P-201ENST00000459460 63 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 RNA5SP236-201ENST00000516169 116 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 RNU6-1212P-201ENST00000517023 104 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
PRPF3O43395 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 RNU6-654P-201ENST00000364373 107 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 Y_RNA.400-201ENST00000383963 111 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 MIR7-2-201ENST00000384970 110 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 MIR513C-201ENST00000401352 84 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 MTATP6P21-201ENST00000440681 189 ntBASIC1.32□□□□□ -2.2
PRPF3O43395 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.32□□□□□ -2.2
PRPF3O43395 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.32□□□□□ -2.2
PRPF3O43395 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
PRPF3O43395 Y_RNA.170-201ENST00000363746 110 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 SNORD18B-201ENST00000365659 72 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 RNU6-125P-201ENST00000384505 107 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 RMST_2.1-201ENST00000617263 136 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 MIR6717-201ENST00000622747 73 ntBASIC1.31□□□□□ -2.2
PRPF3O43395 Y_RNA.120-201ENST00000363304 110 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RNY1P6-201ENST00000384193 109 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 SNORA20-201ENST00000384662 132 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 SNORA26.6-201ENST00000391256 115 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RPS3AP1-201ENST00000413190 320 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 AC067940.1-201ENST00000458411 300 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 SNORA25.12-201ENST00000516202 82 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RNU6-255P-201ENST00000516957 105 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 RNU2-60P-201ENST00000517290 128 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 MIR548X2-201ENST00000579776 100 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 AC021613.1-201ENST00000623880 111 ntBASIC1.3□□□□□ -2.2
PRPF3O43395 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
PRPF3O43395 Y_RNA.215-201ENST00000364204 112 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-580P-201ENST00000365159 107 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 Y_RNA.430-201ENST00000384081 110 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-1319P-201ENST00000390855 104 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-747P-201ENST00000390928 104 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-241P-201ENST00000391148 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms