Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.68□□□□□ -2.3
AP3D1O14617 MIR6504-201ENST00000613520 61 ntBASIC0.68□□□□□ -2.3
AP3D1O14617 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
AP3D1O14617 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
AP3D1O14617 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.60-201ENST00000362831 98 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.75-201ENST00000362927 97 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 RNU6-275P-201ENST00000364910 107 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.308-201ENST00000365043 101 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.351-201ENST00000365436 96 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.430-201ENST00000384081 110 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 Y_RNA.618-201ENST00000410949 107 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 RNU6-177P-201ENST00000411257 104 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 RNY3P16-201ENST00000516338 101 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 SNORD116-25-201ENST00000516517 92 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 MIR378D2-201ENST00000580636 98 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 MIR3149-201ENST00000584629 83 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 MIR6717-201ENST00000622747 73 ntBASIC0.67□□□□□ -2.3
AP3D1O14617 MIR302B-201ENST00000362188 73 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 MIR342-201ENST00000362212 99 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNU6-643P-201ENST00000384018 107 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 MIR520E-201ENST00000384867 87 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 MIR624-201ENST00000385217 97 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNA5SP261-201ENST00000410536 106 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNU7-80P-201ENST00000459562 61 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNU6-111P-201ENST00000517179 105 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 AL162730.1-201ENST00000605734 292 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 RNU2-4P-201ENST00000606190 192 ntBASIC0.66□□□□□ -2.3
AP3D1O14617 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.144-201ENST00000363521 113 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.307-201ENST00000365022 117 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 SNORA25.9-201ENST00000365087 128 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.454-201ENST00000384224 113 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.477-201ENST00000384352 108 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 RNU6-493P-201ENST00000391321 108 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 AL121914.1-201ENST00000450188 156 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
AP3D1O14617 AC009779.6-201ENST00000603972 165 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 AC091932.4-201ENST00000623386 200 ntBASIC0.65□□□□□ -2.31
AP3D1O14617 Y_RNA.65-201ENST00000362846 100 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 Y_RNA.191-201ENST00000363972 113 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 RNU6-597P-201ENST00000365620 102 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 MT-TF-201ENST00000387314 71 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 MIR938-201ENST00000401216 83 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 Y_RNA.797-201ENST00000515977 94 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 SCARNA15-202ENST00000516881 127 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 MRPS18CP4-201ENST00000535821 231 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 Z83818.1-201ENST00000603584 150 ntBASIC0.64□□□□□ -2.31
AP3D1O14617 MIR30D-201ENST00000362283 70 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 SNORA20.1-201ENST00000364790 130 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 MIR125B2-201ENST00000385128 89 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU6-1319P-201ENST00000390855 104 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU6-747P-201ENST00000390928 104 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU6-241P-201ENST00000391148 104 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNA5SP127-201ENST00000411051 133 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU7-45P-201ENST00000459460 63 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 MIR6841-201ENST00000637129 72 ntBASIC0.63□□□□□ -2.31
AP3D1O14617 MIR411-201ENST00000362239 96 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 Y_RNA.412-201ENST00000384001 104 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 RNU4-70P-201ENST00000384579 139 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 MIR1257-201ENST00000408490 117 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 RPS29P1-201ENST00000465274 159 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.62□□□□□ -2.31
AP3D1O14617 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 MIR4452-201ENST00000583004 71 ntBASIC0.62□□□□□ -2.31
AP3D1O14617 Y_RNA.200-201ENST00000364018 102 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 RNU6-923P-201ENST00000364753 107 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 MIR499A-201ENST00000384903 122 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 MT-TG-201ENST00000387429 68 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.61□□□□□ -2.31
AP3D1O14617 CYP3A137P-201ENST00000562436 69 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 MIR4431-201ENST00000579990 94 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.61□□□□□ -2.31
AP3D1O14617 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
AP3D1O14617 Y_RNA.182-201ENST00000363880 111 ntBASIC0.6□□□□□ -2.31
AP3D1O14617 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
AP3D1O14617 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
AP3D1O14617 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
AP3D1O14617 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
AP3D1O14617 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms