Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
CUX2O14529 MIR6740-201ENST00000618268 113 ntBASIC0.29□□□□□ -2.36
CUX2O14529 RNU6-1272P-201ENST00000362776 107 ntBASIC0.28□□□□□ -2.37
CUX2O14529 snoU2_19.2-201ENST00000363024 80 ntBASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.214-201ENST00000364201 112 ntBASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.351-201ENST00000365436 96 ntBASIC0.28□□□□□ -2.37
CUX2O14529 SNORD24-201ENST00000383884 75 ntBASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.410-201ENST00000383992 113 ntBASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.541-201ENST00000384640 113 ntBASIC0.28□□□□□ -2.37
CUX2O14529 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.37
CUX2O14529 RNU2-55P-201ENST00000411146 174 ntBASIC0.28□□□□□ -2.37
CUX2O14529 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.631-201ENST00000459607 101 ntBASIC0.28□□□□□ -2.37
CUX2O14529 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.37
CUX2O14529 AC091959.1-201ENST00000495857 238 ntBASIC0.28□□□□□ -2.37
CUX2O14529 SNORD36C-201ENST00000516733 66 ntBASIC0.28□□□□□ -2.37
CUX2O14529 MIR548AX-201ENST00000580117 73 ntBASIC0.28□□□□□ -2.37
CUX2O14529 Y_RNA.105-201ENST00000363182 111 ntBASIC0.27□□□□□ -2.37
CUX2O14529 RNU6-474P-201ENST00000384243 107 ntBASIC0.27□□□□□ -2.37
CUX2O14529 MIR626-201ENST00000385032 94 ntBASIC0.27□□□□□ -2.37
CUX2O14529 SNORD12C-201ENST00000386307 89 ntBASIC0.27□□□□□ -2.37
CUX2O14529 SNORD100-201ENST00000408573 76 ntBASIC0.27□□□□□ -2.37
CUX2O14529 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.27□□□□□ -2.37
CUX2O14529 uc_338.16-201ENST00000621804 95 ntBASIC0.27□□□□□ -2.37
CUX2O14529 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
CUX2O14529 RNU6-1189P-201ENST00000383958 107 ntBASIC0.26□□□□□ -2.37
CUX2O14529 MIR1257-201ENST00000408490 117 ntBASIC0.26□□□□□ -2.37
CUX2O14529 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
CUX2O14529 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
CUX2O14529 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.26□□□□□ -2.37
CUX2O14529 MIR3678-201ENST00000578455 94 ntBASIC0.26□□□□□ -2.37
CUX2O14529 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
CUX2O14529 Y_RNA.64-201ENST00000362845 102 ntBASIC0.25□□□□□ -2.37
CUX2O14529 RNU6-888P-201ENST00000363010 101 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
CUX2O14529 RPL39P25-201ENST00000449384 154 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNRPGP8-201ENST00000454064 226 ntBASIC0.25□□□□□ -2.37
CUX2O14529 RNU7-96P-201ENST00000459535 64 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SCARNA24.2-201ENST00000516968 130 ntBASIC0.25□□□□□ -2.37
CUX2O14529 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
CUX2O14529 AC131281.1-201ENST00000522984 164 ntBASIC0.25□□□□□ -2.37
CUX2O14529 MIR3152-201ENST00000579801 74 ntBASIC0.25□□□□□ -2.37
CUX2O14529 SNORD92-201ENST00000585078 85 ntBASIC0.25□□□□□ -2.37
CUX2O14529 Y_RNA.217-201ENST00000364214 105 ntBASIC0.24□□□□□ -2.37
CUX2O14529 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
CUX2O14529 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
CUX2O14529 RNU6-211P-201ENST00000384047 107 ntBASIC0.24□□□□□ -2.37
CUX2O14529 RNA5SP261-201ENST00000410536 106 ntBASIC0.24□□□□□ -2.37
CUX2O14529 AC113618.1-201ENST00000416747 285 ntBASIC0.24□□□□□ -2.37
CUX2O14529 Y_RNA.641-201ENST00000459414 105 ntBASIC0.24□□□□□ -2.37
CUX2O14529 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
CUX2O14529 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.24□□□□□ -2.37
CUX2O14529 AC008608.1-201ENST00000603910 127 ntBASIC0.24□□□□□ -2.37
CUX2O14529 AL008718.3-201ENST00000610217 321 ntBASIC0.24□□□□□ -2.37
CUX2O14529 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.24□□□□□ -2.37
CUX2O14529 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.24□□□□□ -2.37
CUX2O14529 uc_338.6-201ENST00000613544 171 ntBASIC0.24□□□□□ -2.37
CUX2O14529 Y_RNA.210-201ENST00000364161 110 ntBASIC0.23□□□□□ -2.37
CUX2O14529 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
CUX2O14529 Y_RNA.455-201ENST00000384230 98 ntBASIC0.23□□□□□ -2.37
CUX2O14529 RPL21P38-201ENST00000418090 167 ntBASIC0.23□□□□□ -2.37
CUX2O14529 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.23□□□□□ -2.37
CUX2O14529 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
CUX2O14529 Y_RNA.634-201ENST00000364811 113 ntBASIC0.22□□□□□ -2.37
CUX2O14529 RNU6-806P-201ENST00000365147 105 ntBASIC0.22□□□□□ -2.37
CUX2O14529 RNY3P5-201ENST00000384127 102 ntBASIC0.22□□□□□ -2.37
CUX2O14529 MIR548A2-201ENST00000384956 97 ntBASIC0.22□□□□□ -2.37
CUX2O14529 RNU6-998P-201ENST00000515894 101 ntBASIC0.22□□□□□ -2.37
CUX2O14529 AC134503.1-201ENST00000633048 54 ntBASIC0.22□□□□□ -2.37
CUX2O14529 UBE2WP1-201ENST00000362030 340 ntBASIC0.22□□□□□ -2.37
CUX2O14529 Y_RNA.158-201ENST00000363651 101 ntBASIC0.22□□□□□ -2.37
CUX2O14529 Y_RNA.199-201ENST00000364014 102 ntBASIC0.22□□□□□ -2.37
CUX2O14529 Y_RNA.229-201ENST00000364347 113 ntBASIC0.22□□□□□ -2.37
CUX2O14529 MT-TF-201ENST00000387314 71 ntBASIC0.22□□□□□ -2.37
CUX2O14529 MIR548I3-201ENST00000408378 149 ntBASIC0.22□□□□□ -2.37
CUX2O14529 RNA5SP237-201ENST00000410414 113 ntBASIC0.22□□□□□ -2.37
CUX2O14529 RNU7-80P-201ENST00000459562 61 ntBASIC0.22□□□□□ -2.37
CUX2O14529 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
CUX2O14529 SNORA22B-201ENST00000383876 138 ntBASIC0.21□□□□□ -2.38
CUX2O14529 Y_RNA.460-201ENST00000384255 102 ntBASIC0.21□□□□□ -2.38
CUX2O14529 Y_RNA.527-201ENST00000384573 102 ntBASIC0.21□□□□□ -2.38
CUX2O14529 MT-TT-201ENST00000387460 66 ntBASIC0.21□□□□□ -2.38
CUX2O14529 Y_RNA.618-201ENST00000410949 107 ntBASIC0.21□□□□□ -2.38
CUX2O14529 Y_RNA.622-201ENST00000411091 108 ntBASIC0.21□□□□□ -2.38
CUX2O14529 RNU6-1338P-201ENST00000516328 91 ntBASIC0.21□□□□□ -2.38
CUX2O14529 RNA5SP153-201ENST00000516498 76 ntBASIC0.21□□□□□ -2.38
CUX2O14529 MIR4667-201ENST00000578933 66 ntBASIC0.21□□□□□ -2.38
CUX2O14529 MIR4645-201ENST00000583158 77 ntBASIC0.21□□□□□ -2.38
CUX2O14529 MIR6717-201ENST00000622747 73 ntBASIC0.21□□□□□ -2.38
CUX2O14529 AL160413.1-201ENST00000622780 310 ntBASIC0.21□□□□□ -2.38
CUX2O14529 Y_RNA.16-201ENST00000362421 102 ntBASIC0.2□□□□□ -2.38
CUX2O14529 Y_RNA.84-201ENST00000363011 104 ntBASIC0.2□□□□□ -2.38
CUX2O14529 RNU6-1289P-201ENST00000384431 106 ntBASIC0.2□□□□□ -2.38
CUX2O14529 Y_RNA.66-201ENST00000362862 102 ntBASIC0.19□□□□□ -2.38
CUX2O14529 Y_RNA.432-201ENST00000384087 111 ntBASIC0.19□□□□□ -2.38
CUX2O14529 Y_RNA.440-201ENST00000384120 114 ntBASIC0.19□□□□□ -2.38
CUX2O14529 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms