Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR6717-201ENST00000622747 73 ntBASIC0.2□□□□□ -2.38
DDX39AO00148 Y_RNA.138-201ENST00000363462 102 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 Y_RNA.275-201ENST00000364726 110 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 RNA5SP117-201ENST00000365294 118 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 SNORA26.6-201ENST00000391256 115 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 SCARNA24.2-201ENST00000516968 130 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 MIR4680-201ENST00000580906 66 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 AC097639.2-201ENST00000603159 172 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 SNORA25.18-201ENST00000607153 114 ntBASIC0.19□□□□□ -2.38
DDX39AO00148 Y_RNA.117-201ENST00000363294 101 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 Y_RNA.152-201ENST00000363578 100 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 Y_RNA.153-201ENST00000363615 91 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 Y_RNA.304-201ENST00000365011 112 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 Y_RNA.432-201ENST00000384087 111 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 RNY3P5-201ENST00000384127 102 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 MT-TT-201ENST00000387460 66 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 MIR548P-201ENST00000408336 84 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 SNRPGP8-201ENST00000454064 226 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 RNU7-45P-201ENST00000459460 63 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 AP001282.2-201ENST00000616149 309 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
DDX39AO00148 MIR302B-201ENST00000362188 73 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 Y_RNA.216-201ENST00000364205 93 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 SNORA1-201ENST00000384107 130 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 Y_RNA.476-201ENST00000384347 108 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 SNORA8.2-201ENST00000384372 139 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 RNA5SP63-201ENST00000391225 112 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 RNU6-1203P-201ENST00000410703 110 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 Y_RNA.622-201ENST00000411091 108 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.17□□□□□ -2.38
DDX39AO00148 AL117351.2-201ENST00000513571 157 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 AL109933.3-201ENST00000619095 188 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.17□□□□□ -2.38
DDX39AO00148 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
DDX39AO00148 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 snoU2_19.4-201ENST00000364329 80 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 RNU6-740P-201ENST00000364734 105 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 Y_RNA.351-201ENST00000365436 96 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 Y_RNA.567-201ENST00000384736 106 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 SNORD93-201ENST00000408813 74 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 AC113618.1-201ENST00000416747 285 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 MTND4LP11-201ENST00000422184 280 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 MIR3171-201ENST00000584270 74 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 MIR8066-201ENST00000617280 78 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.16□□□□□ -2.38
DDX39AO00148 MIR376A2-201ENST00000636782 80 ntBASIC0.16□□□□□ -2.38
DDX39AO00148 Y_RNA.23-201ENST00000362496 106 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 RNU6-653P-201ENST00000363074 106 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 Y_RNA.535-201ENST00000384612 99 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 AL606845.1-201ENST00000404881 255 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 RNA5SP261-201ENST00000410536 106 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 RNU4-83P-201ENST00000410863 133 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 RNU6-453P-201ENST00000516819 85 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 RNU6-1137P-201ENST00000517073 99 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.15□□□□□ -2.39
DDX39AO00148 AL662814.1-201ENST00000617364 121 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 AC078938.1-201ENST00000620993 318 ntBASIC0.15□□□□□ -2.39
DDX39AO00148 Y_RNA.42-201ENST00000362660 108 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 Y_RNA.44-201ENST00000362676 108 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 RNU6-597P-201ENST00000365620 102 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 MIR616-201ENST00000385293 97 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 RNU6-1228P-201ENST00000391014 107 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 RNA5SP237-201ENST00000410414 113 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 SNORD2.1-201ENST00000458762 69 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 RNU6-570P-201ENST00000517051 105 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 AC020661.2-201ENST00000560114 134 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 MIR5197-201ENST00000583721 112 ntBASIC0.14□□□□□ -2.39
DDX39AO00148 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 Y_RNA.199-201ENST00000364014 102 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 Y_RNA.251-201ENST00000364551 99 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 RNU5E-4P-201ENST00000364931 120 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 Y_RNA.617-201ENST00000410920 90 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 RNU7-80P-201ENST00000459562 61 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 RNU6-863P-201ENST00000515989 104 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 MIR3129-201ENST00000581095 76 ntBASIC0.13□□□□□ -2.39
DDX39AO00148 Y_RNA.61-201ENST00000362835 102 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 Y_RNA.430-201ENST00000384081 110 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 Y_RNA.542-201ENST00000384641 111 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 RNU6-651P-201ENST00000411040 105 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 RPL39P25-201ENST00000449384 154 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 RNU6-469P-201ENST00000516253 101 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 AP001094.1-201ENST00000579805 193 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 AC091932.4-201ENST00000623386 200 ntBASIC0.12□□□□□ -2.39
DDX39AO00148 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.13-201ENST00000362403 112 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.82-201ENST00000363000 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.92-201ENST00000363043 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 RNU6-1099P-201ENST00000363533 107 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.235-201ENST00000364412 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.237-201ENST00000364439 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.306-201ENST00000365015 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.312-201ENST00000365089 102 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms