Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.133-201ENST00000363428 110 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.162-201ENST00000363683 102 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 MIR588-201ENST00000384900 83 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 MIR7-2-201ENST00000384970 110 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 RNU6-493P-201ENST00000391321 108 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 MIR1302-3-201ENST00000408128 138 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 RNU7-45P-201ENST00000459460 63 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 MIR4744-201ENST00000581563 82 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 MIR376A2-201ENST00000636782 80 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.556-201ENST00000384677 113 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 RNU2-4P-201ENST00000606190 192 ntBASIC0.62□□□□□ -2.31
NPIPA3F8WFD2 SNORD114-26-201ENST00000363543 72 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 RNU6-923P-201ENST00000364753 107 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 RNY4P28-201ENST00000365281 93 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.542-201ENST00000384641 111 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.562-201ENST00000384695 113 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 SNORD12C-201ENST00000386307 89 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.618-201ENST00000410949 107 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 SEPT7P4-201ENST00000437076 306 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 RNU6-1045P-201ENST00000516321 107 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 MIR4804-201ENST00000581683 73 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
NPIPA3F8WFD2 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 RNU6-1165P-201ENST00000410119 107 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 AL118496.2-201ENST00000448300 230 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 snoU13.2-201ENST00000459201 104 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 MIR5197-201ENST00000583721 112 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
NPIPA3F8WFD2 AL596211.1-201ENST00000569873 2277 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 RNY1P4-201ENST00000384595 115 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 RNU6-578P-201ENST00000390980 103 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 RNU4-43P-201ENST00000410628 137 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 RNU7-80P-201ENST00000459562 61 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 MIR6717-201ENST00000622747 73 ntBASIC0.59□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.539-201ENST00000384635 107 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 MTND1P19-201ENST00000511780 315 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.668-201ENST00000516233 93 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 SNORD116-25-201ENST00000516517 92 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 MIR378D2-201ENST00000580636 98 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 AC091932.4-201ENST00000623386 200 ntBASIC0.58□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.350-201ENST00000365409 98 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 RNU6-1292P-201ENST00000383856 107 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.454-201ENST00000384224 113 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 SNORA26.6-201ENST00000391256 115 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 MIR938-201ENST00000401216 83 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 RNA5SP261-201ENST00000410536 106 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 RNU7-56P-201ENST00000458744 62 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 RNU7-70P-201ENST00000516941 66 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 MIR3128-201ENST00000581957 66 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 AL365205.2-201ENST00000594586 68 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 AC062037.2-201ENST00000610137 73 ntBASIC0.57□□□□□ -2.32
NPIPA3F8WFD2 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.20-201ENST00000362479 113 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.182-201ENST00000363880 111 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 RNU6-364P-201ENST00000384387 107 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 MIR936-201ENST00000401264 98 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 RNU7-185P-201ENST00000459215 60 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
NPIPA3F8WFD2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 RNU4-70P-201ENST00000384579 139 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 MIR1257-201ENST00000408490 117 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 MIR3152-201ENST00000579801 74 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 MIR4308-201ENST00000580634 81 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 U4.1-201ENST00000620349 87 ntBASIC0.55□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.121-201ENST00000363309 113 ntBASIC0.54□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.54□□□□□ -2.32
NPIPA3F8WFD2 RNU6-978P-201ENST00000364371 103 ntBASIC0.54□□□□□ -2.32
NPIPA3F8WFD2 Y_RNA.478-201ENST00000384358 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms