Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 MIR5688-201ENST00000580619 83 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 MIR8066-201ENST00000617280 78 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 MTND4P29-201ENST00000503122 1372 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.13-201ENST00000362403 112 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.42-201ENST00000362660 108 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.152-201ENST00000363578 100 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 SNORA22B-201ENST00000383876 138 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-484P-201ENST00000384016 107 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 SNRPGP8-201ENST00000454064 226 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 SERF1AP1-201ENST00000514575 187 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 MIR8087-201ENST00000612745 78 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 MIR376A2-201ENST00000636782 80 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 AL596211.1-201ENST00000569873 2277 ntBASIC0.07□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.84-201ENST00000363011 104 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.455-201ENST00000384230 98 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 RNU2-55P-201ENST00000411146 174 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-453P-201ENST00000516819 85 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 MIR3129-201ENST00000581095 76 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 AL662814.1-201ENST00000617364 121 ntBASIC0.06□□□□□ -2.4
TRAV39A0A0B4J263 UBE2WP1-201ENST00000362030 340 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.23-201ENST00000362496 106 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-653P-201ENST00000363074 106 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 SNORA72.6-201ENST00000384520 129 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 AL606845.1-201ENST00000404881 255 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 RNA5SP261-201ENST00000410536 106 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-1338P-201ENST00000516328 91 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 RNA5SP268-201ENST00000516828 124 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-570P-201ENST00000517051 105 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 AC113195.1-201ENST00000579952 141 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
TRAV39A0A0B4J263 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.275-201ENST00000364726 110 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 U8.15-201ENST00000390947 134 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 RNU2-59P-201ENST00000410482 191 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 RNA5SP153-201ENST00000516498 76 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 MIR7111-201ENST00000619751 72 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 AL160413.1-201ENST00000622780 310 ntBASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.32-201ENST00000362589 110 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.158-201ENST00000363651 101 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.216-201ENST00000364205 93 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 snoU2_19.4-201ENST00000364329 80 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.466-201ENST00000384294 113 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.509-201ENST00000384506 99 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 AC113618.1-201ENST00000416747 285 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 SEPT7P4-201ENST00000437076 306 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 RNU7-80P-201ENST00000459562 61 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-863P-201ENST00000515989 104 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-1143P-201ENST00000516125 104 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 SNORA31.14-201ENST00000516728 116 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 MIR3152-201ENST00000579801 74 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 MIR6082-201ENST00000613604 109 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 AC091932.4-201ENST00000623386 200 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.44-201ENST00000362676 108 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.138-201ENST00000363462 102 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.276-201ENST00000364732 109 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 RNU5E-4P-201ENST00000364931 120 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 RNY3P5-201ENST00000384127 102 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORA20-201ENST00000384662 132 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-651P-201ENST00000411040 105 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 AC141846.1-201ENST00000568348 142 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 MIR4491-201ENST00000581087 68 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 MIR7107-201ENST00000611489 80 ntBASIC0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.85-201ENST00000363014 111 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.128-201ENST00000363391 112 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-1099P-201ENST00000363533 107 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.454-201ENST00000384224 113 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.540-201ENST00000384638 111 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.588-201ENST00000391254 102 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-1203P-201ENST00000410703 110 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNA5SP127-201ENST00000411051 133 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNA5SP227-201ENST00000516184 113 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 MIR5197-201ENST00000583721 112 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.01□□□□□ -2.41
TRAV39A0A0B4J263 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-1229P-201ENST00000364295 107 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 MIR616-201ENST00000385293 97 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.618-201ENST00000410949 107 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-561P-201ENST00000516222 102 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms