Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL513534.2-201ENST00000603836 250 ntBASIC1.67□□□□□ -2.14
SSX2IPQ9Y2D8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
SSX2IPQ9Y2D8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 SNORD33-201ENST00000362761 85 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 SNORA70.7-201ENST00000384159 133 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 RNU6-959P-201ENST00000384671 107 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 RNU7-96P-201ENST00000459535 64 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 RPS29P24-201ENST00000486345 171 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 RNU7-43P-201ENST00000516554 64 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 RNU2-60P-201ENST00000517290 128 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 MIR548AR-201ENST00000582191 57 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.66□□□□□ -2.14
SSX2IPQ9Y2D8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 AL157777.2-201ENST00000258070 137 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 SNORD113-1-201ENST00000365321 69 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-1211P-201ENST00000459179 105 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-113P-201ENST00000516653 101 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 MIR3121-201ENST00000579680 77 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 MIR8063-201ENST00000621930 81 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 U2.22-201ENST00000636441 106 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-309P-201ENST00000364573 106 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 RNU1-133P-201ENST00000364867 167 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 SNORD28B-201ENST00000390993 75 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 AL606753.1-201ENST00000427435 87 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-998P-201ENST00000515894 101 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 RNU2-13P-201ENST00000515909 113 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-971P-201ENST00000516920 106 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 AL357312.1-201ENST00000603879 298 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 AL022345.2-201ENST00000606307 135 ntBASIC1.64□□□□□ -2.15
SSX2IPQ9Y2D8 SNORA7.1-201ENST00000363750 139 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-1117P-201ENST00000384525 104 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 SNORA19-201ENST00000384737 128 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 MIR520C-201ENST00000385005 87 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 AL035398.1-201ENST00000430869 322 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 RNU7-67P-201ENST00000459003 62 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 AC079140.2-201ENST00000506193 142 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 MIR4764-201ENST00000580680 88 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.63□□□□□ -2.15
SSX2IPQ9Y2D8 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 SNORD1A-201ENST00000364968 72 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 RPS29P29-201ENST00000456396 171 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 RNU7-53P-201ENST00000516705 60 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-922P-201ENST00000516753 99 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 AC243994.1-201ENST00000618627 109 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
SSX2IPQ9Y2D8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 MIR302B-201ENST00000362188 73 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 MIR342-201ENST00000362212 99 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 SNORA24-201ENST00000384096 131 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-62P-201ENST00000516526 102 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 MIR4791-201ENST00000607666 84 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 AC091932.4-201ENST00000623386 200 ntBASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SSX2IPQ9Y2D8 AL596211.1-201ENST00000569873 2277 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 Y_RNA.114-201ENST00000363265 113 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-647P-201ENST00000364243 107 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-80P-201ENST00000384195 107 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 SNORA51.10-201ENST00000384418 136 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 AL158147.1-201ENST00000443970 75 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-958P-201ENST00000516995 106 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 SNORA4-201ENST00000584302 138 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 AC008133.2-201ENST00000624540 351 ntBASIC1.6□□□□□ -2.15
SSX2IPQ9Y2D8 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
SSX2IPQ9Y2D8 AC008267.6-201ENST00000441664 139 ntBASIC1.59□□□□□ -2.15
SSX2IPQ9Y2D8 RNU2-11P-201ENST00000459191 187 ntBASIC1.59□□□□□ -2.15
SSX2IPQ9Y2D8 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
SSX2IPQ9Y2D8 RNU6-508P-201ENST00000363231 103 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 RNY1P6-201ENST00000384193 109 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 MIR570-201ENST00000384917 97 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 MIR7-2-201ENST00000384970 110 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 MIR1276-201ENST00000408707 83 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 RNU7-73P-201ENST00000458743 63 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 snoU13.16-201ENST00000459350 104 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms