Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 uc_338.6-201ENST00000613544 171 ntBASIC0.43□□□□□ -2.34
FOXA2Q9Y261 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
FOXA2Q9Y261 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
FOXA2Q9Y261 MIR302B-201ENST00000362188 73 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.82-201ENST00000363000 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.91-201ENST00000363042 107 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.92-201ENST00000363043 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.235-201ENST00000364412 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.634-201ENST00000364811 113 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.306-201ENST00000365015 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.312-201ENST00000365089 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.322-201ENST00000365151 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-484P-201ENST00000384016 107 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.422-201ENST00000384054 114 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.512-201ENST00000384518 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 MT-TT-201ENST00000387460 66 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-1319P-201ENST00000390855 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-747P-201ENST00000390928 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-241P-201ENST00000391148 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-447P-201ENST00000410293 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-1118P-201ENST00000410382 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-1076P-201ENST00000410397 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-355P-201ENST00000410427 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-791P-201ENST00000410467 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-705P-201ENST00000410601 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-1100P-201ENST00000410691 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-860P-201ENST00000410860 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-1217P-201ENST00000411276 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-785P-201ENST00000411324 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.650-201ENST00000459002 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 RNU6-998P-201ENST00000515894 101 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.777-201ENST00000516982 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.771-201ENST00000598668 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 U6.90-201ENST00000614007 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 U6.70-201ENST00000620287 104 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.789-201ENST00000622480 102 ntBASIC0.42□□□□□ -2.34
FOXA2Q9Y261 MIR335-201ENST00000362173 94 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 Y_RNA.199-201ENST00000364014 102 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 MIR125B2-201ENST00000385128 89 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
FOXA2Q9Y261 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 SNRPGP8-201ENST00000454064 226 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 snoU13.2-201ENST00000459201 104 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 MTATP8P1-201ENST00000467115 207 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 RNA5SP153-201ENST00000516498 76 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 RNU6-635P-201ENST00000516651 102 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.41□□□□□ -2.34
FOXA2Q9Y261 SNORA4-201ENST00000584302 138 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 U2.14-201ENST00000615943 113 ntBASIC0.41□□□□□ -2.34
FOXA2Q9Y261 RNU6-238P-201ENST00000363313 106 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.122-201ENST00000363331 96 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 snoU2_19.4-201ENST00000364329 80 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 RNU1-133P-201ENST00000364867 167 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.354-201ENST00000365448 111 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
FOXA2Q9Y261 MIR616-201ENST00000385293 97 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 AL606845.1-201ENST00000404881 255 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.590-201ENST00000410140 107 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 RNU7-185P-201ENST00000459215 60 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 RNU6-453P-201ENST00000516819 85 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 AP003072.1-201ENST00000531740 145 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 MIR8062-201ENST00000621515 85 ntBASIC0.4□□□□□ -2.35
FOXA2Q9Y261 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
FOXA2Q9Y261 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.440-201ENST00000384120 114 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 SNORD12C-201ENST00000386307 89 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 MT-TW-201ENST00000387382 68 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 RNU6-1228P-201ENST00000391014 107 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 MIR1302-6-201ENST00000408466 90 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 RNU6-1190P-201ENST00000410811 104 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 RPL39P25-201ENST00000449384 154 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.679-201ENST00000516416 91 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.720-201ENST00000517166 92 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 MIR4282-201ENST00000583613 67 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 AC097639.2-201ENST00000603159 172 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 AL365265.1-201ENST00000621045 234 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 U6.104-201ENST00000637979 90 ntBASIC0.39□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.304-201ENST00000365011 112 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.483-201ENST00000384380 101 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 MT-TF-201ENST00000387314 71 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 RNA5SP261-201ENST00000410536 106 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 RNU7-156P-201ENST00000517214 74 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 AC090897.1-201ENST00000580909 226 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 AC006504.6-201ENST00000590142 199 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
FOXA2Q9Y261 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.326-201ENST00000365176 113 ntBASIC0.37□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.351-201ENST00000365436 96 ntBASIC0.37□□□□□ -2.35
FOXA2Q9Y261 Y_RNA.416-201ENST00000384014 113 ntBASIC0.37□□□□□ -2.35
FOXA2Q9Y261 SNORA1-201ENST00000384107 130 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms