Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORD61-201ENST00000384252 73 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 MIR125B2-201ENST00000385128 89 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 MIR1257-201ENST00000408490 117 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 RNA5SP127-201ENST00000411051 133 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 AL731563.1-201ENST00000442202 214 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 SNORA27.4-201ENST00000516650 95 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 RNU7-156P-201ENST00000517214 74 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 AL160413.1-201ENST00000622780 310 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 UBE2WP1-201ENST00000362030 340 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 MIR342-201ENST00000362212 99 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.19-201ENST00000362462 99 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 RNU6-770P-201ENST00000363929 105 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 SNORA8.3-201ENST00000384679 139 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 MIR215-201ENST00000384858 110 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 MIR548I3-201ENST00000408378 149 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 RNU6-602P-201ENST00000411155 105 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 RPL21P38-201ENST00000418090 167 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 snoU13.2-201ENST00000459201 104 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 RNU7-96P-201ENST00000459535 64 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 AC131281.1-201ENST00000522984 164 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 snoU18.1-201ENST00000629629 71 ntBASIC0.24□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.214-201ENST00000364201 112 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU6-474P-201ENST00000384243 107 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 SNORD12C-201ENST00000386307 89 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 SNORA26-201ENST00000391286 122 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 SNORD100-201ENST00000408573 76 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 SNORA40.8-201ENST00000411034 126 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 SNORD71-201ENST00000411292 86 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 ELOCP20-201ENST00000422460 345 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU2-11P-201ENST00000459191 187 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU6-998P-201ENST00000515894 101 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1143P-201ENST00000516125 104 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNY3P15-201ENST00000516297 97 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 RNU6-504P-201ENST00000516568 104 ntBASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.158-201ENST00000363651 101 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 RNU4-67P-201ENST00000364569 141 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 RNA5SP117-201ENST00000365294 118 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.460-201ENST00000384255 102 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 MIR563-201ENST00000385080 79 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 MT-TF-201ENST00000387314 71 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 SNORD77.3-201ENST00000391113 65 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 RNU2-55P-201ENST00000411146 174 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 MTATP6P23-201ENST00000440153 476 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 AC113195.1-201ENST00000579952 141 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 AC023932.2-201ENST00000603176 175 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
NPIPA1Q9UND3 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 SNORA22B-201ENST00000383876 138 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 SNORD92-201ENST00000585078 85 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 uc_338.16-201ENST00000621804 95 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 AC134503.1-201ENST00000633048 54 ntBASIC0.21□□□□□ -2.38
NPIPA1Q9UND3 MTND4P29-201ENST00000503122 1372 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.16-201ENST00000362421 102 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNA5SP257-201ENST00000363023 116 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNU6-806P-201ENST00000365147 105 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNU6-484P-201ENST00000384016 107 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNU6-211P-201ENST00000384047 107 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 MIR548P-201ENST00000408336 84 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 MIR3678-201ENST00000578455 94 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 AC097639.2-201ENST00000603159 172 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 MIR2909-201ENST00000617113 69 ntBASIC0.2□□□□□ -2.38
NPIPA1Q9UND3 MIR30D-201ENST00000362283 70 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.26-201ENST00000362539 101 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.19□□□□□ -2.38
NPIPA1Q9UND3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms