Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 SNORD28B-201ENST00000390993 75 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 AL451046.2-201ENST00000403074 277 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 RNU7-43P-201ENST00000516554 64 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-919P-201ENST00000516731 104 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 RNU6-958P-201ENST00000516995 106 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 MIR4255-201ENST00000579351 72 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 MIR8074-201ENST00000615081 81 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 AC243994.1-201ENST00000618627 109 ntBASIC2.23□□□□□ -2.05
ZNRF3Q9ULT6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 AL161935.2-201ENST00000414627 60 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 RNU7-164P-201ENST00000459221 62 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 COX6CP6-201ENST00000490840 228 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 RNY4P20-201ENST00000516678 93 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 MIR4303-201ENST00000581299 66 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 MIR6129-201ENST00000616087 109 ntBASIC2.22□□□□□ -2.05
ZNRF3Q9ULT6 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.537-201ENST00000384626 109 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 MIR759-201ENST00000390224 91 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.649-201ENST00000459077 103 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 MIR4305-201ENST00000583252 102 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 MIR4791-201ENST00000607666 84 ntBASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNRF3Q9ULT6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.213-201ENST00000364178 111 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.355-201ENST00000365462 98 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 SNORA51.10-201ENST00000384418 136 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 MIR570-201ENST00000384917 97 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 RNA5SP261-201ENST00000410536 106 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 RNA5SP445-201ENST00000515889 115 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 AC021613.1-201ENST00000623880 111 ntBASIC2.2□□□□□ -2.06
ZNRF3Q9ULT6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.81-201ENST00000362997 102 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.298-201ENST00000364960 107 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 SNORA24-201ENST00000384096 131 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 SNORD116-21-201ENST00000384507 92 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 MIR520C-201ENST00000385005 87 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AL035461.1-201ENST00000421490 332 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 RNU2-13P-201ENST00000515909 113 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 MIR4764-201ENST00000580680 88 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 HSPE1P19-201ENST00000603327 295 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
ZNRF3Q9ULT6 AL022718.1-201ENST00000412004 84 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 RNU7-73P-201ENST00000458743 63 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 SNORA44.1-201ENST00000517031 108 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 AC008133.2-201ENST00000624540 351 ntBASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.18□□□□□ -2.06
ZNRF3Q9ULT6 SNORA25.9-201ENST00000365087 128 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNU6-880P-201ENST00000384526 107 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNU6-429P-201ENST00000384582 108 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 MIR548A1-201ENST00000385041 97 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 RNU7-123P-201ENST00000515911 60 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 MIR502-201ENST00000606349 86 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZNRF3Q9ULT6 Y_RNA.198-201ENST00000364013 98 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 RNU7-45P-201ENST00000459460 63 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 SNORD111.1-201ENST00000516421 86 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 RNU6-922P-201ENST00000516753 99 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 MIR8063-201ENST00000621930 81 ntBASIC2.16□□□□□ -2.06
ZNRF3Q9ULT6 snoU13.16-201ENST00000459350 104 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 SNORA77B-201ENST00000578179 125 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 AL357312.1-201ENST00000603879 298 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZNRF3Q9ULT6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU6-44P-201ENST00000384045 107 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU6-1319P-201ENST00000390855 104 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU6-747P-201ENST00000390928 104 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU6-241P-201ENST00000391148 104 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNA5SP144-201ENST00000410846 116 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU6-177P-201ENST00000411257 104 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 snoU13.9-201ENST00000458927 103 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU7-95P-201ENST00000459222 64 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 Y_RNA.709-201ENST00000516952 92 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 AL513534.2-201ENST00000603836 250 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.14□□□□□ -2.07
ZNRF3Q9ULT6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms