Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.787-201ENST00000616522 101 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.780-201ENST00000617336 101 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.801-201ENST00000619005 101 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.789-201ENST00000622480 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 SNORD38B-202ENST00000625943 69 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-110P-201ENST00000384508 104 ntBASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-1228P-201ENST00000391014 107 ntBASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 SNRPGP8-201ENST00000454064 226 ntBASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 MIR4264-201ENST00000583520 66 ntBASIC1.23□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.326-201ENST00000365176 113 ntBASIC1.22□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.512-201ENST00000384518 102 ntBASIC1.22□□□□□ -2.21
SHROOM4Q9ULL8 SNORD99-201ENST00000408612 74 ntBASIC1.22□□□□□ -2.21
SHROOM4Q9ULL8 RNA5SP153-201ENST00000516498 76 ntBASIC1.22□□□□□ -2.21
SHROOM4Q9ULL8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-888P-201ENST00000363010 101 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 MIR606-201ENST00000384851 96 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 RNU7-73P-201ENST00000458743 63 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 RNU7-53P-201ENST00000516705 60 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 AP000942.4-201ENST00000604811 241 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 AC104465.1-201ENST00000611365 139 ntBASIC1.21□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.2□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
SHROOM4Q9ULL8 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
SHROOM4Q9ULL8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.145-201ENST00000363527 102 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.199-201ENST00000364014 102 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-125P-201ENST00000384505 107 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 AC008737.2-201ENST00000599446 118 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 MIR8055-201ENST00000610739 97 ntBASIC1.19□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MT-TT-201ENST00000387460 66 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MTATP8P1-201ENST00000467115 207 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 SNORA18.4-201ENST00000516440 124 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 U2.14-201ENST00000615943 113 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.574-201ENST00000384766 95 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 MIR616-201ENST00000385293 97 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 AL606845.1-201ENST00000404881 255 ntBASIC1.18□□□□□ -2.22
SHROOM4Q9ULL8 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 MIR518F-201ENST00000384973 87 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 SNORA79-201ENST00000408376 140 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-938P-201ENST00000411285 103 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 RPS29P24-201ENST00000486345 171 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 MIR4282-201ENST00000583613 67 ntBASIC1.17□□□□□ -2.22
SHROOM4Q9ULL8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 MT-TW-201ENST00000387382 68 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 RNU6-651P-201ENST00000411040 105 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 AC244023.1-201ENST00000426884 112 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 AC242498.1-201ENST00000604134 111 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 AL365265.1-201ENST00000621045 234 ntBASIC1.16□□□□□ -2.22
SHROOM4Q9ULL8 SNORA63C-201ENST00000364578 129 ntBASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.461-201ENST00000384263 103 ntBASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-205P-201ENST00000390858 107 ntBASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 AC006461.1-201ENST00000412637 326 ntBASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 MTND5P15-201ENST00000434246 349 ntBASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM4Q9ULL8 AC023934.1-201ENST00000574529 2389 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-1011P-201ENST00000384668 107 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 MIR548A2-201ENST00000384956 97 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 MIR605-201ENST00000385078 83 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 RNU1-119P-201ENST00000391122 165 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 RPS26P5-201ENST00000418544 335 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 AC067863.3-201ENST00000624172 122 ntBASIC1.14□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.13□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-484P-201ENST00000384016 107 ntBASIC1.13□□□□□ -2.23
SHROOM4Q9ULL8 SNORD77.3-201ENST00000391113 65 ntBASIC1.13□□□□□ -2.23
SHROOM4Q9ULL8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.352-201ENST00000365439 102 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.416-201ENST00000384014 113 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.483-201ENST00000384380 101 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 AL606490.4-201ENST00000423117 127 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 AF228730.3-201ENST00000436691 102 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-977P-201ENST00000516411 103 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-453P-201ENST00000516819 85 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.262-201ENST00000364641 102 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-728P-201ENST00000365375 104 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 RNU6-229P-201ENST00000516614 102 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 SNORD36C-201ENST00000516733 66 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.12□□□□□ -2.23
SHROOM4Q9ULL8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 MIR302B-201ENST00000362188 73 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.304-201ENST00000365011 112 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.459-201ENST00000384251 102 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 MIR146A-201ENST00000385201 99 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms