Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU6-934P-201ENST00000365154 107 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 SNORA27-201ENST00000384323 126 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 MIR520F-201ENST00000384824 87 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 SNORA26.6-201ENST00000391256 115 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 AC113618.1-201ENST00000416747 285 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU6-977P-201ENST00000516411 103 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 MIR4662B-201ENST00000579498 81 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 MIR4282-201ENST00000583613 67 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 AL356055.1-201ENST00000602528 446 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 AC011921.3-201ENST00000605540 361 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 SNORD114-26-201ENST00000363543 72 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.237-201ENST00000364439 102 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNU6-1227P-201ENST00000383981 107 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 SNORA1-201ENST00000384107 130 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 SNORA8.3-201ENST00000384679 139 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 MT-TW-201ENST00000387382 68 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 SNORD77.3-201ENST00000391113 65 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNU7-62P-201ENST00000458856 62 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNU7-67P-201ENST00000459003 62 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNU6-998P-201ENST00000515894 101 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 RNU6-570P-201ENST00000517051 105 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 MIR4643-201ENST00000577473 78 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 MIR4771-2-201ENST00000577758 74 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 MIR4771-1-201ENST00000582617 74 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 AC008608.1-201ENST00000603910 127 ntBASIC0.31□□□□□ -2.36
CDH9Q9ULB4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.31□□□□□ -2.36
CDH9Q9ULB4 MIR30D-201ENST00000362283 70 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 MIR18A-201ENST00000362310 71 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.202-201ENST00000364083 110 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNU6-514P-201ENST00000384208 107 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNU6-472P-201ENST00000384299 107 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNU2-55P-201ENST00000411146 174 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 AC023449.1-201ENST00000454464 154 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNU6-561P-201ENST00000516222 102 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 RNU6-365P-201ENST00000517113 106 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
CDH9Q9ULB4 AC010332.2-201ENST00000613083 1904 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 RNU6-653P-201ENST00000363074 106 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 SNORD12C-201ENST00000386307 89 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 MIR548F4-201ENST00000408515 105 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 AC107297.1-201ENST00000459991 176 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 RNA5SP153-201ENST00000516498 76 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 RNU6-504P-201ENST00000516568 104 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 MIR3612-201ENST00000579753 87 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 AC006006.1-201ENST00000603082 144 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 U2.14-201ENST00000615943 113 ntBASIC0.29□□□□□ -2.36
CDH9Q9ULB4 MIR335-201ENST00000362173 94 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RNU6-597P-201ENST00000365620 102 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RNY3P5-201ENST00000384127 102 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 MIR193B-201ENST00000384907 83 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 MIR616-201ENST00000385293 97 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 SNORD100-201ENST00000408573 76 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AC096949.1-201ENST00000412047 152 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AL138752.1-201ENST00000452964 351 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.28□□□□□ -2.36
CDH9Q9ULB4 RNU7-96P-201ENST00000459535 64 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 TRBVB-201ENST00000477100 408 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AC037487.3-201ENST00000606668 112 ntBASIC0.28□□□□□ -2.36
CDH9Q9ULB4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.27□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 SNORD38B-201ENST00000384690 67 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 MIR125B2-201ENST00000385128 89 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AL606845.1-201ENST00000404881 255 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 MIR548I3-201ENST00000408378 149 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 RNU2-70P-201ENST00000410718 179 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
CDH9Q9ULB4 RNU2-11P-201ENST00000459191 187 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 RNU7-45P-201ENST00000459460 63 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 MTATP8P1-201ENST00000467115 207 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms