Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 RNA5SP285-201ENST00000516619 119 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 AC100767.1-201ENST00000528178 123 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 MIR4305-201ENST00000583252 102 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 RNU4-83P-201ENST00000410863 133 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 PMCHL1-202ENST00000423102 261 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AL512326.2-201ENST00000426359 151 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AF228730.3-201ENST00000436691 102 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 TRBVB-201ENST00000477100 408 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 AP001282.2-201ENST00000616149 309 ntBASIC-0.02□□□□□ -2.41
NUP50Q9UKX7 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 MIR526A2-201ENST00000390198 65 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 SNORA26.6-201ENST00000391256 115 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 SNORD93-201ENST00000408813 74 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 RNU6-126P-201ENST00000516685 103 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 RNU6-365P-201ENST00000517113 106 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 AP003733.2-201ENST00000529409 171 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 MIR6755-201ENST00000619993 66 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 AC112487.2-201ENST00000637950 304 ntBASIC-0.03□□□□□ -2.41
NUP50Q9UKX7 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 MIR329-2-201ENST00000385029 84 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 RNU6-469P-201ENST00000516253 101 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 MIR7107-201ENST00000611489 80 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 MIR6717-201ENST00000622747 73 ntBASIC-0.04□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 RNU4-10P-201ENST00000364383 140 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 RNY3P1-201ENST00000365085 102 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 AC069271.1-201ENST00000445577 156 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 RNU7-45P-201ENST00000459460 63 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 RNU6-504P-201ENST00000516568 104 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 RNU6-897P-201ENST00000517135 105 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 AC104408.1-201ENST00000605241 170 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 AL008718.3-201ENST00000610217 321 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 AC090574.1-201ENST00000623186 233 ntBASIC-0.05□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 SNORA9.1-201ENST00000362412 131 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 RNU6-290P-201ENST00000365212 101 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 SNORA63.7-201ENST00000365579 123 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 RNU6-662P-201ENST00000384253 104 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 RNU6-507P-201ENST00000516045 100 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 RNU6-875P-201ENST00000516488 106 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 AL662814.1-201ENST00000617364 121 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 uc_338.22-201ENST00000622722 187 ntBASIC-0.06□□□□□ -2.42
NUP50Q9UKX7 MIR342-201ENST00000362212 99 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 RNU6-653P-201ENST00000363074 106 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 RNU6-597P-201ENST00000365620 102 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 PCNPP3-201ENST00000393579 471 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 RNU6-121P-201ENST00000410525 99 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 MIR5688-201ENST00000580619 83 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 MIR6082-201ENST00000613604 109 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 MIR6828-201ENST00000636181 60 ntBASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 RNU6-484P-201ENST00000384016 107 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 U8.15-201ENST00000390947 134 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 SUMO1P3-201ENST00000439961 304 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 MTND4P19-201ENST00000446659 478 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 MTND4LP30-201ENST00000454092 297 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 SNORA31.14-201ENST00000516728 116 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms