Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-1338P-201ENST00000516328 91 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 SCARNA24.2-201ENST00000516968 130 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 MIR4680-201ENST00000580906 66 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 MIR3171-201ENST00000584270 74 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.202-201ENST00000364083 110 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 RNU2-70P-201ENST00000410718 179 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 RNU6-602P-201ENST00000411155 105 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 snoU13.2-201ENST00000459201 104 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 RNU6-998P-201ENST00000515894 101 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-364P-201ENST00000384387 107 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.572-201ENST00000384757 98 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 MIR125B2-201ENST00000385128 89 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1319P-201ENST00000390855 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-747P-201ENST00000390928 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-241P-201ENST00000391148 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 MIR548I3-201ENST00000408378 149 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-447P-201ENST00000410293 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-355P-201ENST00000410427 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-791P-201ENST00000410467 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-705P-201ENST00000410601 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-860P-201ENST00000410860 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 HMGN1P33-201ENST00000432945 451 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 AF228730.3-201ENST00000436691 102 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNU2-11P-201ENST00000459191 187 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 RNA5SP153-201ENST00000516498 76 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 uc_338.6-201ENST00000613544 171 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.153-201ENST00000363615 91 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.216-201ENST00000364205 93 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 MIR1257-201ENST00000408490 117 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 AL138752.1-201ENST00000452964 351 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 RNU7-185P-201ENST00000459215 60 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 AC020661.2-201ENST00000560114 134 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 AC090897.1-201ENST00000580909 226 ntBASIC0.3□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 RNU6-484P-201ENST00000384016 107 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 MT-TF-201ENST00000387314 71 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 MTND5P22-201ENST00000458380 195 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 AC092634.7-201ENST00000621022 103 ntBASIC0.29□□□□□ -2.36
CLCF1Q9UBD9 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 MIR302B-201ENST00000362188 73 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.117-201ENST00000363294 101 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 MIR563-201ENST00000385080 79 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RNU6-985P-201ENST00000410182 104 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RNA5SP261-201ENST00000410536 106 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RNU7-102P-201ENST00000458948 62 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RNU6-570P-201ENST00000517051 105 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 RNU7-156P-201ENST00000517214 74 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 AC097639.2-201ENST00000603159 172 ntBASIC0.28□□□□□ -2.36
CLCF1Q9UBD9 MIR342-201ENST00000362212 99 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 MT-TT-201ENST00000387460 66 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 RNU6-679P-201ENST00000391003 106 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 RNU6-1228P-201ENST00000391014 107 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 SNRPGP8-201ENST00000454064 226 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 TRBVB-201ENST00000477100 408 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 MIR1273G-201ENST00000577677 100 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 SNORD92-201ENST00000585078 85 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.27□□□□□ -2.37
CLCF1Q9UBD9 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms