Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 SNORA75.5-201ENST00000391291 81 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 AL392103.1-201ENST00000447000 198 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 RNU7-73P-201ENST00000458743 63 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 RNU2-11P-201ENST00000459191 187 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 RNU6-998P-201ENST00000515894 101 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 MIR3646-201ENST00000578301 84 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 AL353997.5-201ENST00000618886 171 ntBASIC1.44□□□□□ -2.18
DDX56Q9NY93 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
DDX56Q9NY93 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
DDX56Q9NY93 Y_RNA.180-201ENST00000363867 113 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 RNU6-151P-201ENST00000364158 107 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 RNU6-449P-201ENST00000383914 107 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 SNORD116-18-201ENST00000383961 92 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 RPS23P4-201ENST00000487908 423 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 RNU6-1149P-201ENST00000516810 97 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 SCARNA15-202ENST00000516881 127 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 MIR4769-201ENST00000584126 77 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 AP000942.3-201ENST00000603702 160 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 MTND5P32-201ENST00000560711 1802 ntBASIC1.43□□□□□ -2.18
DDX56Q9NY93 RNY1P11-201ENST00000363759 113 ntBASIC1.42□□□□□ -2.18
DDX56Q9NY93 Y_RNA.398-201ENST00000383952 99 ntBASIC1.42□□□□□ -2.18
DDX56Q9NY93 Y_RNA.580-201ENST00000391004 95 ntBASIC1.42□□□□□ -2.18
DDX56Q9NY93 RNU7-80P-201ENST00000459562 61 ntBASIC1.42□□□□□ -2.18
DDX56Q9NY93 AC021753.1-201ENST00000635724 168 ntBASIC1.42□□□□□ -2.18
DDX56Q9NY93 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 Y_RNA.52-201ENST00000362760 96 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 RNU4-11P-201ENST00000365287 132 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 Y_RNA.454-201ENST00000384224 113 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 AP000753.3-201ENST00000604083 169 ntBASIC1.41□□□□□ -2.18
DDX56Q9NY93 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
DDX56Q9NY93 MIR302B-201ENST00000362188 73 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 SNORD114-24-201ENST00000365029 72 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 RNU6-613P-201ENST00000410412 108 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 RNU7-70P-201ENST00000516941 66 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 MTND5P41-201ENST00000517498 206 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX56Q9NY93 AC131055.1-201ENST00000584626 316 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 AC012676.2-201ENST00000619258 186 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 Y_RNA.778-201ENST00000620203 90 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 AC091932.4-201ENST00000623386 200 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 MIR6516-201ENST00000630554 81 ntBASIC1.4□□□□□ -2.19
DDX56Q9NY93 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 MT-TN-201ENST00000387400 73 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 SNORD111-201ENST00000408139 94 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 AC090844.1-201ENST00000422019 156 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 HMGN1P33-201ENST00000432945 451 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.39□□□□□ -2.19
DDX56Q9NY93 RNU7-45P-201ENST00000459460 63 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX56Q9NY93 AC112693.2-201ENST00000556538 232 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 MIR8055-201ENST00000610739 97 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
DDX56Q9NY93 SNORD113.3-201ENST00000364630 78 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 RNU6-209P-201ENST00000384118 107 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 Y_RNA.464-201ENST00000384282 110 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 MIR548I3-201ENST00000408378 149 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 MIR548I1-201ENST00000408810 149 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 RNU6-1190P-201ENST00000410811 104 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 FABP5P4-201ENST00000437203 171 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 AL020996.3-201ENST00000606617 222 ntBASIC1.38□□□□□ -2.19
DDX56Q9NY93 RNA5SP432-201ENST00000362480 116 ntBASIC1.37□□□□□ -2.19
DDX56Q9NY93 RNU1-133P-201ENST00000364867 167 ntBASIC1.37□□□□□ -2.19
DDX56Q9NY93 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
DDX56Q9NY93 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
DDX56Q9NY93 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
DDX56Q9NY93 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
DDX56Q9NY93 RNA5SP99-201ENST00000364020 114 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 RNU6-654P-201ENST00000364373 107 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 Y_RNA.251-201ENST00000364551 99 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 AC067940.1-201ENST00000458411 300 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 MIR4264-201ENST00000583520 66 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 HSPE1P19-201ENST00000603327 295 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 AC106800.4-201ENST00000614905 153 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
DDX56Q9NY93 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 Y_RNA.584-201ENST00000391090 114 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 MIR942-201ENST00000401111 86 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 RNU6-255P-201ENST00000516957 105 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 AC023827.1-201ENST00000569247 97 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 MIR4661-201ENST00000582720 75 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 MIR4781-201ENST00000585250 76 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
DDX56Q9NY93 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
DDX56Q9NY93 MIR377-201ENST00000362145 69 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 Y_RNA.170-201ENST00000363746 110 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 RNU6-125P-201ENST00000384505 107 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 RNA5SP95-201ENST00000410319 137 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms