Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORD12C-201ENST00000386307 89 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 MT-TF-201ENST00000387314 71 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 MT-TT-201ENST00000387460 66 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-747P-201ENST00000390928 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-241P-201ENST00000391148 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-447P-201ENST00000410293 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-355P-201ENST00000410427 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-791P-201ENST00000410467 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-705P-201ENST00000410601 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-860P-201ENST00000410860 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-785P-201ENST00000411324 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 RNU7-102P-201ENST00000458948 62 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 SNORD92-201ENST00000585078 85 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 AL356055.1-201ENST00000602528 446 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 U6.90-201ENST00000614007 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 U6.70-201ENST00000620287 104 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.82-201ENST00000363000 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.92-201ENST00000363043 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.235-201ENST00000364412 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.306-201ENST00000365015 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.312-201ENST00000365089 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.322-201ENST00000365151 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 MIR616-201ENST00000385293 97 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.622-201ENST00000411091 108 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 MTCYBP6-201ENST00000441810 138 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.650-201ENST00000459002 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 TRBVB-201ENST00000477100 408 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 AC002350.1-201ENST00000490759 375 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.777-201ENST00000516982 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.771-201ENST00000598668 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 AC092634.7-201ENST00000621022 103 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.789-201ENST00000622480 102 ntBASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.36□□□□□ -2.35
ZCCHC3Q9NUD5 snoU2_19.4-201ENST00000364329 80 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.237-201ENST00000364439 102 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.304-201ENST00000365011 112 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-639P-201ENST00000384074 107 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1109P-201ENST00000391187 107 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 SNORA26.6-201ENST00000391256 115 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 AL606845.1-201ENST00000404881 255 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-453P-201ENST00000516819 85 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 U2.14-201ENST00000615943 113 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 MIR5087-201ENST00000635826 76 ntBASIC0.35□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-797P-201ENST00000363101 109 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 SNORA1-201ENST00000384107 130 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-1228P-201ENST00000391014 107 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-651P-201ENST00000411040 105 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 AL078603.1-201ENST00000603824 313 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 MIR6717-201ENST00000622747 73 ntBASIC0.34□□□□□ -2.36
ZCCHC3Q9NUD5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 MIR342-201ENST00000362212 99 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 RNU1-133P-201ENST00000364867 167 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-679P-201ENST00000391003 106 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 RNA5SP261-201ENST00000410536 106 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.701-201ENST00000516812 110 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 MIR376A2-201ENST00000636782 80 ntBASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
ZCCHC3Q9NUD5 MIR335-201ENST00000362173 94 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 MIR302B-201ENST00000362188 73 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 MIR216A-201ENST00000385063 110 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
ZCCHC3Q9NUD5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNA5SP517-201ENST00000364724 117 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-713P-201ENST00000384761 107 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.590-201ENST00000410140 107 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNU7-45P-201ENST00000459460 63 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNU7-80P-201ENST00000459562 61 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 MIR4282-201ENST00000583613 67 ntBASIC0.31□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-653P-201ENST00000363074 106 ntBASIC0.3□□□□□ -2.36
ZCCHC3Q9NUD5 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
ZCCHC3Q9NUD5 RNU6-381P-201ENST00000391259 108 ntBASIC0.3□□□□□ -2.36
ZCCHC3Q9NUD5 Y_RNA.604-201ENST00000410574 102 ntBASIC0.3□□□□□ -2.36
ZCCHC3Q9NUD5 SNORA25.12-201ENST00000516202 82 ntBASIC0.3□□□□□ -2.36
ZCCHC3Q9NUD5 RNA5SP220-201ENST00000516298 104 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1132 ms