Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SNORD115-41-201ENST00000363608 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-11-201ENST00000363616 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-5-201ENST00000363633 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-39-201ENST00000363694 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-4-201ENST00000363810 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-16-201ENST00000363887 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-6-201ENST00000363942 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-42-201ENST00000364273 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-15-201ENST00000364809 81 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-1-201ENST00000364961 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-26-201ENST00000365067 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-10-201ENST00000365073 81 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-43-201ENST00000365503 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-36-201ENST00000365629 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD77.3-201ENST00000391113 65 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNU6-613P-201ENST00000410412 108 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNU2-64P-201ENST00000411315 191 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 AC087499.4-201ENST00000448505 178 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 AL138752.1-201ENST00000452964 351 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNU7-67P-201ENST00000459003 62 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNA5SP153-201ENST00000516498 76 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 RNU6-126P-201ENST00000516685 103 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 SNORD115-40-201ENST00000606510 82 ntBASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
SMC4Q9NTJ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMC4Q9NTJ3 MIR146A-201ENST00000385201 99 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 SNORA40.5-201ENST00000391061 128 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1□□□□□ -2.25
SMC4Q9NTJ3 RNU6-1023P-201ENST00000516137 106 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 MIR2115-201ENST00000516657 100 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 AP000942.4-201ENST00000604811 241 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 AC134878.1-201ENST00000619901 243 ntBASIC1□□□□□ -2.25
SMC4Q9NTJ3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 SNORA27-201ENST00000384323 126 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 AC004941.2-201ENST00000427009 228 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 HMGN1P33-201ENST00000432945 451 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 U7.7-201ENST00000459276 60 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 snoU13.21-201ENST00000459368 105 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 RNU6-197P-201ENST00000516680 100 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 MIR4744-201ENST00000581563 82 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SMC4Q9NTJ3 SNORD113.3-201ENST00000364630 78 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 SNORA20.1-201ENST00000364790 130 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 RNU6-728P-201ENST00000365375 104 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 RNU6-578P-201ENST00000390980 103 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 AC107297.1-201ENST00000459991 176 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 MIR3129-201ENST00000581095 76 ntBASIC0.98□□□□□ -2.25
SMC4Q9NTJ3 RNU6-396P-201ENST00000365369 105 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 Y_RNA.478-201ENST00000384358 107 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 SNORA2B-201ENST00000384583 137 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 RNU6-205P-201ENST00000390858 107 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 AL121914.1-201ENST00000450188 156 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 MIR8055-201ENST00000610739 97 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 MIR6866-201ENST00000638146 69 ntBASIC0.97□□□□□ -2.25
SMC4Q9NTJ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 MIR377-201ENST00000362145 69 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 RNU6-47P-201ENST00000383866 107 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 MT-TN-201ENST00000387400 73 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 SNORA26-201ENST00000391286 122 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 snoU13.16-201ENST00000459350 104 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 RPS29P24-201ENST00000486345 171 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 uc_338.6-201ENST00000613544 171 ntBASIC0.96□□□□□ -2.26
SMC4Q9NTJ3 MIR342-201ENST00000362212 99 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 RNU6-103P-201ENST00000363686 107 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 RNU4-43P-201ENST00000410628 137 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 AL035398.1-201ENST00000430869 322 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 AC067940.1-201ENST00000458411 300 ntBASIC0.95□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.182-201ENST00000363880 111 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNU6-978P-201ENST00000364371 103 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 MIR605-201ENST00000385078 83 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNU6-918P-201ENST00000391219 106 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNU7-73P-201ENST00000458743 63 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms