Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 MIR1262-201ENST00000408276 93 ntBASIC2.74□□□□□ -1.97
ATG3Q9NT62 RNA5SP137-201ENST00000516833 135 ntBASIC2.74□□□□□ -1.97
ATG3Q9NT62 AC026271.5-201ENST00000577873 130 ntBASIC2.74□□□□□ -1.97
ATG3Q9NT62 AC245060.5-201ENST00000610778 3293 ntBASIC2.74□□□□□ -1.97
ATG3Q9NT62 MIRLET7C-201ENST00000362160 84 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 Y_RNA.241-201ENST00000364470 117 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 RNA5SP482-201ENST00000391269 118 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 RNU6-279P-201ENST00000391297 101 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 RNA5SP270-201ENST00000411361 118 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 AL022718.1-201ENST00000412004 84 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 CST2P1-201ENST00000425770 87 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 MIR4666B-201ENST00000578142 81 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG3Q9NT62 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG3Q9NT62 ZNF355P-201ENST00000427301 3216 ntBASIC2.73□□□□□ -1.97
ATG3Q9NT62 RNU6-616P-201ENST00000384353 107 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 MRPL35P3-201ENST00000421557 364 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 AC245047.3-201ENST00000429428 127 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 AL035398.1-201ENST00000430869 322 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 AC069257.2-201ENST00000441819 155 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 RPL23AP63-201ENST00000498752 471 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 RNU7-193P-201ENST00000516723 65 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 AC022513.1-201ENST00000624512 117 ntBASIC2.72□□□□□ -1.97
ATG3Q9NT62 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
ATG3Q9NT62 Y_RNA.95-201ENST00000363079 95 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU6-1201P-201ENST00000384227 107 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 Y_RNA.470-201ENST00000384307 117 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 SNORA18-201ENST00000384416 132 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU4-69P-201ENST00000410677 143 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU2-11P-201ENST00000459191 187 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU7-171P-201ENST00000459581 62 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU6-857P-201ENST00000515893 110 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 Y_RNA.676-201ENST00000516393 96 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 RNU7-181P-201ENST00000517234 74 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 AC090821.2-201ENST00000523552 176 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.71□□□□□ -1.98
ATG3Q9NT62 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG3Q9NT62 RNU1-17P-201ENST00000363022 152 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 Y_RNA.99-201ENST00000363138 105 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 SNORD115-13-201ENST00000363358 82 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 SNORD115-16-201ENST00000363887 82 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 SNORD115-1-201ENST00000364961 82 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 Y_RNA.437-201ENST00000384113 113 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 SNORD116-22-201ENST00000384430 92 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 MIR515-2-201ENST00000384883 83 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 MIR515-1-201ENST00000384884 83 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 RNU7-96P-201ENST00000459535 64 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 AC005336.3-201ENST00000623833 2679 ntBASIC2.7□□□□□ -1.98
ATG3Q9NT62 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG3Q9NT62 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ATG3Q9NT62 RNA5SP493-201ENST00000364115 91 ntBASIC2.69□□□□□ -1.98
ATG3Q9NT62 Y_RNA.377-201ENST00000365644 108 ntBASIC2.69□□□□□ -1.98
ATG3Q9NT62 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG3Q9NT62 STAG3L5P-204ENST00000443759 179 ntBASIC2.69□□□□□ -1.98
ATG3Q9NT62 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG3Q9NT62 Y_RNA.783-201ENST00000613546 102 ntBASIC2.69□□□□□ -1.98
ATG3Q9NT62 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.69□□□□□ -1.98
ATG3Q9NT62 AL442644.1-201ENST00000454390 3105 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-34-201ENST00000362441 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-12-201ENST00000362583 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-29-201ENST00000362834 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-9-201ENST00000362912 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-21-201ENST00000362963 81 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-14-201ENST00000363090 81 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-41-201ENST00000363608 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-11-201ENST00000363616 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-5-201ENST00000363633 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-39-201ENST00000363694 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-4-201ENST00000363810 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-6-201ENST00000363942 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-42-201ENST00000364273 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD45B-201ENST00000364617 72 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-15-201ENST00000364809 81 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-26-201ENST00000365067 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-10-201ENST00000365073 81 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-43-201ENST00000365503 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD115-36-201ENST00000365629 82 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORD38C-201ENST00000384381 69 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 RNU6-163P-201ENST00000384396 106 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 Y_RNA.620-201ENST00000411009 88 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 RNU7-113P-201ENST00000459273 62 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 Y_RNA.659-201ENST00000515994 113 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORA31.10-201ENST00000516482 106 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 SNORA31.25-201ENST00000517242 134 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 MIR3169-201ENST00000578032 83 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 MIR4668-201ENST00000582284 70 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 MIR548AE2-201ENST00000583456 67 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 AP000942.3-201ENST00000603702 160 ntBASIC2.68□□□□□ -1.98
ATG3Q9NT62 RNU6-160P-201ENST00000384591 107 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 RNU6-887P-201ENST00000410660 100 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 AC015922.2-201ENST00000435593 184 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 RNU7-28P-201ENST00000516759 62 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 Y_RNA.705-201ENST00000516862 110 ntBASIC2.67□□□□□ -1.98
ATG3Q9NT62 MIR8054-201ENST00000620877 86 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms