Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 MIR520H-201ENST00000385126 88 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-381P-201ENST00000391259 108 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-977P-201ENST00000516411 103 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNA5SP153-201ENST00000516498 76 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 MIR4282-201ENST00000583613 67 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 MIR376A2-201ENST00000636782 80 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 Z97988.1-201ENST00000637697 135 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 AC010332.2-201ENST00000613083 1904 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-653P-201ENST00000363074 106 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.145-201ENST00000363527 102 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 SNORA36.2-201ENST00000384004 127 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.459-201ENST00000384251 102 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 SNORD77.3-201ENST00000391113 65 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 RNU2-38P-201ENST00000410856 79 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 RNU7-96P-201ENST00000459535 64 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 AL117187.1-201ENST00000555482 181 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 MIR4452-201ENST00000583004 71 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 AC097639.2-201ENST00000603159 172 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 AC020891.4-201ENST00000605745 93 ntBASIC0.53□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.47-201ENST00000362697 108 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 RNU4-17P-201ENST00000365598 141 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.518-201ENST00000384552 113 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 MIR588-201ENST00000384900 83 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 MIR548I3-201ENST00000408378 149 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-602P-201ENST00000411155 105 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 RNU7-45P-201ENST00000459460 63 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 RPS29P1-201ENST00000465274 159 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-998P-201ENST00000515894 101 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 MIR3129-201ENST00000581095 76 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 MIR4676-201ENST00000583078 72 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 MIR6788-201ENST00000618842 66 ntBASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.352-201ENST00000365439 102 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-738P-201ENST00000384531 106 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 RNY3P16-201ENST00000516338 101 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 MIR4804-201ENST00000581683 73 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 AL442067.1-201ENST00000613261 223 ntBASIC0.51□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-694P-201ENST00000364071 147 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.262-201ENST00000364641 102 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-1011P-201ENST00000384668 107 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 SNORD12C-201ENST00000386307 89 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 AC011921.3-201ENST00000605540 361 ntBASIC0.5□□□□□ -2.33
EXOSC3Q9NQT5 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.149-201ENST00000363558 117 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.292-201ENST00000364904 97 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-728P-201ENST00000365375 104 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 MIR499A-201ENST00000384903 122 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 MIR151B-201ENST00000584249 96 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 AL360085.1-201ENST00000604713 532 ntBASIC0.49□□□□□ -2.33
EXOSC3Q9NQT5 SNORA79-201ENST00000408376 140 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 MIR548J-201ENST00000408833 112 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 SNORD127-201ENST00000458892 86 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 snoU13.2-201ENST00000459201 104 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
EXOSC3Q9NQT5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.288-201ENST00000364854 92 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 Y_RNA.308-201ENST00000365043 101 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 SNORA26.6-201ENST00000391256 115 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 RNU6-493P-201ENST00000391321 108 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 SEPT7P4-201ENST00000437076 306 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 AL121914.1-201ENST00000450188 156 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 RNU7-56P-201ENST00000458744 62 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 MIR3612-201ENST00000579753 87 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 MIR5197-201ENST00000583721 112 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 MIR6717-201ENST00000622747 73 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
EXOSC3Q9NQT5 SNORD27-201ENST00000363981 72 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-597P-201ENST00000365620 102 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.477-201ENST00000384352 108 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 MIR18B-201ENST00000454574 71 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 RNU7-185P-201ENST00000459215 60 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 AC091932.4-201ENST00000623386 200 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms