Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SEPT14P17-201ENST00000617978 177 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HINT3Q9NQE9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
HINT3Q9NQE9 MIR342-201ENST00000362212 99 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 RNU2-64P-201ENST00000411315 191 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
HINT3Q9NQE9 RNU2-11P-201ENST00000459191 187 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 RNU7-121P-201ENST00000516604 62 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
HINT3Q9NQE9 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RNU7-90P-201ENST00000459216 62 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RNU7-80P-201ENST00000459562 61 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
HINT3Q9NQE9 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 MIR2115-201ENST00000516657 100 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 FTX_2.1-201ENST00000618816 94 ntBASIC1.09□□□□□ -2.23
HINT3Q9NQE9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 RNU6-396P-201ENST00000365369 105 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 MIR548I3-201ENST00000408378 149 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 RNU6-321P-201ENST00000410912 106 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 SCARNA15-202ENST00000516881 127 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 MIR8055-201ENST00000610739 97 ntBASIC1.08□□□□□ -2.24
HINT3Q9NQE9 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MIR337-201ENST00000362281 93 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 RNU6-654P-201ENST00000364373 107 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 SNORA75.5-201ENST00000391291 81 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 AC090844.1-201ENST00000422019 156 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MIR3646-201ENST00000578301 84 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MIR6844-201ENST00000637122 62 ntBASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
HINT3Q9NQE9 MTND5P32-201ENST00000560711 1802 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNY1P10-201ENST00000363268 113 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 Y_RNA.270-201ENST00000364693 104 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNU6-125P-201ENST00000384505 107 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNU6-613P-201ENST00000410412 108 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 HMGN1P33-201ENST00000432945 451 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 RNU7-70P-201ENST00000516941 66 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 MIR3658-201ENST00000636291 56 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 Z97988.1-201ENST00000637697 135 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 AL596211.1-201ENST00000569873 2277 ntBASIC1.06□□□□□ -2.24
HINT3Q9NQE9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 SNORA1.1-201ENST00000364671 133 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 RNU6-818P-201ENST00000364837 108 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 MT-TN-201ENST00000387400 73 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 PCNPP3-201ENST00000393579 471 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 RNA5SP95-201ENST00000410319 137 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 AC023827.1-201ENST00000569247 97 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 AC098479.1-201ENST00000609225 154 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.05□□□□□ -2.24
HINT3Q9NQE9 RNU6-886P-201ENST00000384319 105 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 SNORD37.2-201ENST00000391075 66 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 RNU6-588P-201ENST00000410281 105 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 RNU7-45P-201ENST00000459460 63 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 AC036111.3-201ENST00000526389 112 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
HINT3Q9NQE9 MIR3668-201ENST00000582138 75 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 AC131055.1-201ENST00000584626 316 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
HINT3Q9NQE9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
HINT3Q9NQE9 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 SNORD38B-201ENST00000384690 67 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 RNU6-394P-201ENST00000410735 107 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 MIR4264-201ENST00000583520 66 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 MIR4781-201ENST00000585250 76 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 AC104465.1-201ENST00000611365 139 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 SNORD38B-202ENST00000625943 69 ntBASIC1.03□□□□□ -2.24
HINT3Q9NQE9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 SNORA2B-201ENST00000384583 137 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms