Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 Y_RNA.306-201ENST00000365015 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.312-201ENST00000365089 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.322-201ENST00000365151 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 SNORD24-201ENST00000383884 75 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 SNORA24-201ENST00000384096 131 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.459-201ENST00000384251 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 SNORA27-201ENST00000384323 126 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 RNU6-1190P-201ENST00000410811 104 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AC244023.1-201ENST00000426884 112 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AC087499.4-201ENST00000448505 178 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.650-201ENST00000459002 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 snoU13.16-201ENST00000459350 104 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 RNU6-561P-201ENST00000516222 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 RNU6-504P-201ENST00000516568 104 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.777-201ENST00000516982 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 MIR5688-201ENST00000580619 83 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.771-201ENST00000598668 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AP000753.3-201ENST00000604083 169 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AC242498.1-201ENST00000604134 111 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 uc_338.6-201ENST00000613544 171 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.789-201ENST00000622480 102 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AC010487.4-201ENST00000637027 61 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 AL589743.1-201ENST00000551932 2712 ntBASIC0.51□□□□□ -2.33
LHX9Q9NQ69 MIR1-1-201ENST00000362147 71 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 MIR342-201ENST00000362212 99 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.7-201ENST00000362352 102 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 RNU6-369P-201ENST00000362515 102 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.47-201ENST00000362697 108 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.176-201ENST00000363815 109 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.199-201ENST00000364014 102 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.304-201ENST00000365011 112 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.432-201ENST00000384087 111 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 SNORA40.5-201ENST00000391061 128 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 MIR1827-201ENST00000408549 66 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 RNU2-38P-201ENST00000410856 79 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 AL117187.1-201ENST00000555482 181 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 AC104465.1-201ENST00000611365 139 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.76-201ENST00000362931 109 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 RNU6-1309P-201ENST00000363305 108 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.145-201ENST00000363527 102 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 SNORA1-201ENST00000384107 130 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 RNU6-738P-201ENST00000384531 106 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 MIR616-201ENST00000385293 97 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 RPS29P24-201ENST00000486345 171 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 RNY3P16-201ENST00000516338 101 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 MIR4771-2-201ENST00000577758 74 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 MIR4771-1-201ENST00000582617 74 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 MIR4282-201ENST00000583613 67 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 U6.104-201ENST00000637979 90 ntBASIC0.49□□□□□ -2.33
LHX9Q9NQ69 Y_RNA.23-201ENST00000362496 106 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU6-653P-201ENST00000363074 106 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU6-934P-201ENST00000365154 107 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU6-580P-201ENST00000365159 107 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU6-1011P-201ENST00000384668 107 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 MT-TN-201ENST00000387400 73 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU6-381P-201ENST00000391259 108 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 RNU7-62P-201ENST00000458856 62 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 AC025627.3-201ENST00000582078 182 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 MIR4264-201ENST00000583520 66 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 AL360085.1-201ENST00000604713 532 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 MIR376A2-201ENST00000636782 80 ntBASIC0.48□□□□□ -2.33
LHX9Q9NQ69 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.47□□□□□ -2.33
LHX9Q9NQ69 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU6-1189P-201ENST00000383958 107 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU2-55P-201ENST00000411146 174 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.47□□□□□ -2.33
LHX9Q9NQ69 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU7-73P-201ENST00000458743 63 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU2-11P-201ENST00000459191 187 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU7-45P-201ENST00000459460 63 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU6-126P-201ENST00000516685 103 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 RNU7-53P-201ENST00000516705 60 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 MIR3129-201ENST00000581095 76 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 MIR8055-201ENST00000610739 97 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 AL136317.1-201ENST00000612653 226 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 MIR6740-201ENST00000618268 113 ntBASIC0.47□□□□□ -2.33
LHX9Q9NQ69 AC010332.2-201ENST00000613083 1904 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
LHX9Q9NQ69 Y_RNA.352-201ENST00000365439 102 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 RNU4-17P-201ENST00000365598 141 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 Y_RNA.440-201ENST00000384120 114 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 RNY3P5-201ENST00000384127 102 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 SNORD38B-201ENST00000384690 67 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 MIR520F-201ENST00000384824 87 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 RNU1-119P-201ENST00000391122 165 ntBASIC0.46□□□□□ -2.34
LHX9Q9NQ69 SNORA26-201ENST00000391286 122 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms