Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.43-201ENST00000362670 111 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.163-201ENST00000363702 113 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 U8.6-201ENST00000364939 135 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.328-201ENST00000365208 113 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.348-201ENST00000365403 103 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU6-1014P-201ENST00000383940 103 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 SNORA26.6-201ENST00000391256 115 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 HMGN1P33-201ENST00000432945 451 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 SNORD123-201ENST00000459473 70 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU6-917P-201ENST00000516294 104 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU6-109P-201ENST00000516364 107 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU6-184P-201ENST00000516514 107 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU7-70P-201ENST00000516941 66 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 RNU6-537P-201ENST00000517277 103 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 AC106754.2-201ENST00000623006 233 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 AC021613.1-201ENST00000623880 111 ntBASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.67□□□□□ -2.14
NRIP3Q9NQ35 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.323-201ENST00000365157 109 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 Y_RNA.470-201ENST00000384307 117 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 RNU7-80P-201ENST00000459562 61 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 AC004812.1-201ENST00000540773 146 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 MIR5582-201ENST00000579697 68 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 AC087741.2-201ENST00000619415 172 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 AL513423.1-201ENST00000621695 132 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 SNORD3E-202ENST00000627253 216 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 MIR1255B1-201ENST00000636325 63 ntBASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NRIP3Q9NQ35 RNU6-756P-201ENST00000383997 107 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 MIR548D2-201ENST00000384955 97 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 RNA5SP508-201ENST00000411327 119 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 RNU7-96P-201ENST00000459535 64 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 RNU6-958P-201ENST00000516995 106 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 MIR3683-201ENST00000580847 82 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 MIR4435-1-201ENST00000582552 80 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 RNU6-94P-201ENST00000607728 107 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 MIR6841-201ENST00000637129 72 ntBASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
NRIP3Q9NQ35 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.213-201ENST00000364178 111 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.370-201ENST00000365589 108 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU6-32P-201ENST00000383948 107 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 SNORA24-201ENST00000384096 131 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU6-13P-201ENST00000384248 107 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU6-12P-201ENST00000384604 107 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU6-41P-201ENST00000384741 107 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR194-1-201ENST00000384892 85 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR590-201ENST00000385008 97 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR452-201ENST00000385020 85 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR136-201ENST00000385207 82 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 AL445685.2-201ENST00000422551 342 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 AL035398.1-201ENST00000430869 322 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 AL353813.1-201ENST00000440700 253 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 AC068339.1-201ENST00000526965 141 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR5009-201ENST00000578736 100 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 FAM106DP-201ENST00000586416 501 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 MIR4791-201ENST00000607666 84 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.64□□□□□ -2.15
NRIP3Q9NQ35 RNU6-766P-201ENST00000362478 107 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 MIR488-201ENST00000365739 83 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 SNORA51.5-201ENST00000384126 131 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 RNU6-950P-201ENST00000384651 107 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.677-201ENST00000516401 85 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 RNU7-6P-201ENST00000516845 62 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 MIR4648-201ENST00000580107 72 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
NRIP3Q9NQ35 RNY4P6-201ENST00000363667 96 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.454-201ENST00000384224 113 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.531-201ENST00000384589 121 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AC019129.1-201ENST00000403786 261 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AC090844.1-201ENST00000422019 156 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 UBE2DNL-203ENST00000474922 222 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 RPS23P4-201ENST00000487908 423 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AC113410.1-201ENST00000505029 247 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 RNU6-412P-201ENST00000516434 106 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AP001318.4-201ENST00000616637 121 ntBASIC1.62□□□□□ -2.15
NRIP3Q9NQ35 AL589743.1-201ENST00000551932 2712 ntBASIC1.61□□□□□ -2.15
NRIP3Q9NQ35 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
NRIP3Q9NQ35 Y_RNA.309-201ENST00000365046 111 ntBASIC1.61□□□□□ -2.15
NRIP3Q9NQ35 RNU6-49P-201ENST00000384256 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms