Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.3□□□□□ -2.46
VCX3AQ9NNX9 MIR5692C2-201ENST00000577959 77 ntBASIC-0.3□□□□□ -2.46
VCX3AQ9NNX9 AL606534.2-204ENST00000635008 178 ntBASIC-0.3□□□□□ -2.46
VCX3AQ9NNX9 RNU1-115P-201ENST00000365329 160 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 RNU6-716P-201ENST00000365621 103 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 RNU6-949P-201ENST00000384040 107 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 RNU6V-201ENST00000384105 107 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 MIR598-201ENST00000384868 97 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 RNA5SP163-201ENST00000410304 99 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 SNORA25.16-201ENST00000516741 121 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 AP003072.1-201ENST00000531740 145 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 AC084781.2-201ENST00000615568 161 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 AL596211.1-201ENST00000569873 2277 ntBASIC-0.31□□□□□ -2.46
VCX3AQ9NNX9 SNORD113-8-201ENST00000363497 74 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 RNU6-652P-201ENST00000365488 107 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 MT-TL1-201ENST00000386347 75 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 MIR526A2-201ENST00000390198 65 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 RNU6-876P-201ENST00000391295 104 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 HSPE1P25-201ENST00000455484 251 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 SNORD4A-201ENST00000459174 72 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 RNU6-475P-201ENST00000516073 104 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 SNORA20.3-201ENST00000516880 132 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 MIR6841-201ENST00000637129 72 ntBASIC-0.32□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 RNU6-514P-201ENST00000384208 107 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 MIR548AD-201ENST00000584780 82 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 SNORA70.25-201ENST00000612741 95 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 MIR376A2-201ENST00000636782 80 ntBASIC-0.33□□□□□ -2.46
VCX3AQ9NNX9 SNORA63.5-201ENST00000363548 123 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 RNA5SP245-201ENST00000364239 121 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 PMCHL1-202ENST00000423102 261 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 RNU7-152P-201ENST00000458982 64 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 RNU6-277P-201ENST00000516272 106 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 AC040926.1-201ENST00000530195 238 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 MIR376A1-201ENST00000616574 68 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 AC091932.4-201ENST00000623386 200 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 AL162376.1-201ENST00000624117 175 ntBASIC-0.34□□□□□ -2.46
VCX3AQ9NNX9 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 SNORA18.1-201ENST00000363418 128 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 RNU4-10P-201ENST00000364383 140 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 RNU6-726P-201ENST00000364680 107 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 RNU6-302P-201ENST00000365249 107 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 RNU6-484P-201ENST00000384016 107 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 AC108059.2-201ENST00000434626 151 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 AC007485.1-201ENST00000616755 206 ntBASIC-0.35□□□□□ -2.47
VCX3AQ9NNX9 MIR330-201ENST00000362196 94 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 SNORA22.1-201ENST00000362701 134 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 RNU4-90P-201ENST00000362773 141 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 RNY1P13-201ENST00000365030 105 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 SNORA1-201ENST00000384107 130 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 SNORA18-201ENST00000384416 132 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 SNORA20-201ENST00000384662 132 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 RNU6-507P-201ENST00000516045 100 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 MIR5706-201ENST00000579841 80 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 RN7SL793P-201ENST00000583259 296 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 MIR5197-201ENST00000583721 112 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 AC006006.1-201ENST00000603082 144 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 AC097639.2-201ENST00000603159 172 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 AL008718.3-201ENST00000610217 321 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 AL442067.1-201ENST00000613261 223 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 MIR1302-1-201ENST00000637932 143 ntBASIC-0.36□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 SNORD115-24-201ENST00000363528 82 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 MIR193B-201ENST00000384907 83 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.37□□□□□ -2.47
VCX3AQ9NNX9 RNU7-80P-201ENST00000459562 61 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms