Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 SNORA7.5-201ENST00000410672 110 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP57-201ENST00000459463 123 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 RNU6-970P-201ENST00000516312 107 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 SNORA72.7-201ENST00000516349 94 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 SNORA31.17-201ENST00000516953 127 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 MIR3618-201ENST00000580330 88 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 AC012493.3-201ENST00000604494 112 ntBASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDH18Q9HCL0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 MIR660-201ENST00000385235 97 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP508-201ENST00000411327 119 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 RPS23P4-201ENST00000487908 423 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP33-201ENST00000516687 98 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 AC243994.1-201ENST00000618627 109 ntBASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH18Q9HCL0 SNORA22.1-201ENST00000362701 134 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNU6-203P-201ENST00000384038 104 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNU6-616P-201ENST00000384353 107 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 MIR605-201ENST00000385078 83 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RPS29P29-201ENST00000456396 171 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 RNU6-904P-201ENST00000516206 101 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 DEFB131E-201ENST00000532329 154 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 MIR548AE2-201ENST00000583456 67 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
PCDH18Q9HCL0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 SNORA1.2-201ENST00000365189 134 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 Y_RNA.544-201ENST00000384650 113 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 RNU6-795P-201ENST00000516323 103 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 RNU6-762P-201ENST00000517107 102 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
PCDH18Q9HCL0 RNY3P2-201ENST00000362918 102 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 RNU6-747P-201ENST00000390928 104 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 RNU6-241P-201ENST00000391148 104 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 RNU6-177P-201ENST00000411257 104 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 MIR1270-201ENST00000459320 83 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 MIR548Z-201ENST00000584743 97 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 MIR6717-201ENST00000622747 73 ntBASIC2.08□□□□□ -2.08
PCDH18Q9HCL0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 SNORA26.6-201ENST00000391256 115 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 MTATP8P2-201ENST00000435212 202 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 AL513423.1-201ENST00000621695 132 ntBASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
PCDH18Q9HCL0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RNU4-67P-201ENST00000364569 141 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 Y_RNA.507-201ENST00000384500 99 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 MIR1912-201ENST00000410389 80 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RNU4-69P-201ENST00000410677 143 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RNU6-162P-201ENST00000516228 103 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 RNA5SP481-201ENST00000516814 122 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDH18Q9HCL0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 MIR424-201ENST00000362227 98 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 Y_RNA.388-201ENST00000383919 113 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 SNORA70.7-201ENST00000384159 133 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 RNU6-439P-201ENST00000384188 106 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 RNU2-13P-201ENST00000515909 113 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 MIR3152-201ENST00000579801 74 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 AL020996.3-201ENST00000606617 222 ntBASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDH18Q9HCL0 AL442644.1-201ENST00000454390 3105 ntBASIC2.04□□□□□ -2.08
PCDH18Q9HCL0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.04□□□□□ -2.08
PCDH18Q9HCL0 RNU4-36P-201ENST00000364294 144 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms