Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SNORD115-4-201ENST00000363810 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-6-201ENST00000363942 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-42-201ENST00000364273 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-15-201ENST00000364809 81 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-26-201ENST00000365067 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-10-201ENST00000365073 81 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-43-201ENST00000365503 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-36-201ENST00000365629 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORA27-201ENST00000384323 126 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNU6-24P-201ENST00000384440 107 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNA5SP109-201ENST00000391010 116 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORA17.3-201ENST00000391159 129 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNU6-321P-201ENST00000410912 106 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 AC108667.1-201ENST00000428618 249 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 AL606517.2-201ENST00000442855 241 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 RNU7-6P-201ENST00000516845 62 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 MIRLET7C-201ENST00000362160 84 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 RNU6-832P-201ENST00000363319 107 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 RNU6-776P-201ENST00000364403 104 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 RNU6-1022P-201ENST00000365049 104 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 MIR605-201ENST00000385078 83 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 STAG3L5P-204ENST00000443759 179 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 SNORA31.4-201ENST00000516049 129 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 AC019288.1-201ENST00000557918 224 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 MIR4694-201ENST00000578534 80 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 AC022513.1-201ENST00000624512 117 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 AC095038.3-201ENST00000634439 195 ntBASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CNTNAP4Q9C0A0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 SNORA1.2-201ENST00000365189 134 ntBASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 AC015922.2-201ENST00000435593 184 ntBASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 RNU6-998P-201ENST00000515894 101 ntBASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.299-201ENST00000364973 94 ntBASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 RNU6-788P-201ENST00000390967 104 ntBASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 AC073261.1-201ENST00000429409 121 ntBASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 Z96811.1-201ENST00000445880 108 ntBASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 RNU4-16P-201ENST00000364737 141 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 RNU6-60P-201ENST00000364792 103 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.620-201ENST00000411009 88 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 RNU6-56P-201ENST00000516986 93 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 MIR5002-201ENST00000584713 97 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 AL513534.2-201ENST00000603836 250 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 AC006160.2-201ENST00000637708 154 ntBASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
CNTNAP4Q9C0A0 RNU6-363P-201ENST00000362895 105 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-19-201ENST00000363098 82 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-18-201ENST00000363293 82 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-17-201ENST00000364612 82 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 SNORD116-22-201ENST00000384430 92 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 MIR1267-201ENST00000408723 78 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 AL022718.1-201ENST00000412004 84 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 SNORA31.10-201ENST00000516482 106 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 MIR3152-201ENST00000579801 74 ntBASIC2.53□□□□□ -2
CNTNAP4Q9C0A0 WWP1P1-201ENST00000466609 2769 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 SNORA70.7-201ENST00000384159 133 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 RNU6-679P-201ENST00000391003 106 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 RNA5SP465-201ENST00000391195 109 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 SNORA40.18-201ENST00000391200 128 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 MIR889-201ENST00000401280 79 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 AL512326.2-201ENST00000426359 151 ntBASIC2.52□□□□□ -2.01
CNTNAP4Q9C0A0 RNU6-661P-201ENST00000362409 107 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 RNU4-67P-201ENST00000364569 141 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 MIR452-201ENST00000385020 85 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 RNA5SP261-201ENST00000410536 106 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 RNU6-733P-201ENST00000410759 104 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 RNA5SP144-201ENST00000410846 116 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 MRPL35P3-201ENST00000421557 364 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 RPS23P4-201ENST00000487908 423 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 MIR4668-201ENST00000582284 70 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CNTNAP4Q9C0A0 Y_RNA.94-201ENST00000363068 106 ntBASIC2.5□□□□□ -2.01
CNTNAP4Q9C0A0 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
CNTNAP4Q9C0A0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.5□□□□□ -2.01
CNTNAP4Q9C0A0 RNA5SP325-201ENST00000363756 130 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms