Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR517B-201ENST00000385102 67 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 RNU6-332P-201ENST00000391193 108 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 SNORD110-201ENST00000408189 75 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 SNORA36B-201ENST00000410438 131 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 BX276092.1-201ENST00000427368 251 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 FCF1P4-201ENST00000448326 183 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 AC091951.2-201ENST00000500762 203 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 SNORA25.13-201ENST00000516395 103 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 AC022441.3-201ENST00000605737 136 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 RNU6-597P-201ENST00000365620 102 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 RNU6-901P-201ENST00000384593 106 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 SNORD56B-201ENST00000384713 71 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 AC074085.1-201ENST00000413598 418 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 AL512360.1-201ENST00000555346 234 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 MIR1244-1-201ENST00000612829 85 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 MIR1244-3-201ENST00000635744 85 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 MIR1244-2-201ENST00000636449 85 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 MIR1244-4-202ENST00000636813 85 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 MTND5P18-201ENST00000445624 1801 ntBASIC-1.05□□□□□ -2.58
TRIM4Q9C037 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 RNU6-158P-201ENST00000517104 100 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 AC141846.1-201ENST00000568348 142 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 AC011373.1-201ENST00000607270 237 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 MIR6717-201ENST00000622747 73 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 AC022140.2-201ENST00000623500 188 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 MIR3662-201ENST00000637030 95 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.06□□□□□ -2.58
TRIM4Q9C037 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
TRIM4Q9C037 SNORA26.6-201ENST00000391256 115 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 MTND4P28-201ENST00000426217 387 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 RNU7-96P-201ENST00000459535 64 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 RN7SKP19-201ENST00000516016 252 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 RNU6-864P-201ENST00000516256 108 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 SNORD36C-201ENST00000516733 66 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 MTND3P12-201ENST00000559068 328 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 AC122108.2-201ENST00000611946 526 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 AC073114.1-201ENST00000612027 490 ntBASIC-1.07□□□□□ -2.58
TRIM4Q9C037 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.07□□□□□ -2.58
TRIM4Q9C037 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 SNORD41.1-201ENST00000391000 69 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU6-908P-201ENST00000410160 94 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU6-956P-201ENST00000458868 103 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU6-998P-201ENST00000515894 101 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNA5SP33-201ENST00000516687 98 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU7-149P-201ENST00000516739 59 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU7-188P-201ENST00000517063 64 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 MIR3179-1-201ENST00000578940 84 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 MIR3179-2-201ENST00000579107 84 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 MIR3179-3-201ENST00000579566 84 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 AL162413.1-201ENST00000603198 110 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 MIR3179-4-201ENST00000617599 84 ntBASIC-1.08□□□□□ -2.58
TRIM4Q9C037 RNU6-653P-201ENST00000363074 106 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 SNORD115-44-201ENST00000365391 82 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 MIR9-2-201ENST00000384838 87 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 RNU7-104P-201ENST00000459398 79 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 AC010655.3-201ENST00000478818 450 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 RNU7-161P-201ENST00000517289 62 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 MIR4280-201ENST00000582178 76 ntBASIC-1.09□□□□□ -2.58
TRIM4Q9C037 MTND1P2-201ENST00000430604 821 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 AC244505.6-201ENST00000452829 130 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 SCARNA18B-201ENST00000458806 135 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 MIR2053-201ENST00000459295 91 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 RNU6-566P-201ENST00000516790 107 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 AC005357.1-201ENST00000588399 301 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 DEFB117-201ENST00000602356 141 ntBASIC-1.1□□□□□ -2.59
TRIM4Q9C037 SNORD115-2-201ENST00000362842 82 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU6-451P-201ENST00000362921 107 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNY4P7-201ENST00000364600 96 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU6-949P-201ENST00000384040 107 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 SNORD64-201ENST00000386683 67 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 SNORD115-47-201ENST00000391226 86 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU7-141P-201ENST00000459304 62 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU7-45P-201ENST00000459460 63 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 AC022137.1-201ENST00000483735 151 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RN7SKP295-201ENST00000517264 153 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.11□□□□□ -2.59
TRIM4Q9C037 NBR2-204ENST00000587322 63 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 AC092794.2-201ENST00000620933 563 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 AL359880.1-201ENST00000621879 266 ntBASIC-1.11□□□□□ -2.59
TRIM4Q9C037 RNU6-509P-201ENST00000363519 107 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms