Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-181P-201ENST00000363225 107 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-996P-201ENST00000365438 107 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-83P-201ENST00000384568 112 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-710P-201ENST00000410424 105 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AC022028.1-201ENST00000412054 408 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU7-115P-201ENST00000516433 55 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-445P-201ENST00000516949 107 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AL353803.5-201ENST00000599815 141 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AC145423.2-201ENST00000610631 239 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 MIR6502-201ENST00000617296 76 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-595P-201ENST00000363944 107 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-636P-201ENST00000384598 107 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-1242P-201ENST00000391052 103 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AC073415.1-201ENST00000449240 153 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU7-45P-201ENST00000459460 63 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 SNORD36C-201ENST00000516733 66 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 AC007494.3-201ENST00000624660 743 ntBASIC-2.08□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 SNORD116-9-201ENST00000384000 95 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 SNORD116-3-201ENST00000384287 95 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 SNORD116-8-201ENST00000384365 95 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 SNORD116-7-201ENST00000384404 95 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 SNORD116-5-201ENST00000384462 95 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 MTATP6P13-201ENST00000438531 667 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 MTND3P7-201ENST00000474435 343 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 AC055872.1-201ENST00000570978 278 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 MIR4460-201ENST00000577862 86 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 YWHAEP3-201ENST00000582767 121 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 AC122108.2-201ENST00000611946 526 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 DISC2.1-201ENST00000612827 205 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 U6.109-201ENST00000636749 87 ntBASIC-2.09□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.1□□□□□ -2.75
SCAPERQ9BY12 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.1□□□□□ -2.75
SCAPERQ9BY12 RNU6-831P-201ENST00000384548 107 ntBASIC-2.1□□□□□ -2.75
SCAPERQ9BY12 RNU6-576P-201ENST00000390854 102 ntBASIC-2.1□□□□□ -2.75
SCAPERQ9BY12 AC097635.1-201ENST00000450678 155 ntBASIC-2.1□□□□□ -2.75
SCAPERQ9BY12 RNU6-500P-201ENST00000362349 107 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 SNORA72.3-201ENST00000365074 132 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.378-201ENST00000365652 113 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 SNORA18-201ENST00000384416 132 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 AC098614.3-201ENST00000438957 440 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 AL353813.1-201ENST00000440700 253 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 RNU7-63P-201ENST00000459054 62 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 RNU6-408P-201ENST00000515910 100 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 AC018638.8-201ENST00000588755 281 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 AC079248.2-201ENST00000623779 326 ntBASIC-2.11□□□□□ -2.75
SCAPERQ9BY12 MIR342-201ENST00000362212 99 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.364-201ENST00000365532 101 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 RNU6-128P-201ENST00000383976 107 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 MIR517A-201ENST00000385001 87 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 MIR519E-201ENST00000385075 84 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.587-201ENST00000391210 103 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 AL080274.1-201ENST00000605565 220 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 AC093783.1-201ENST00000612976 329 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 AC022140.2-201ENST00000623500 188 ntBASIC-2.12□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.13□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.13□□□□□ -2.75
SCAPERQ9BY12 AC023449.1-201ENST00000454464 154 ntBASIC-2.13□□□□□ -2.75
SCAPERQ9BY12 AL118558.2-201ENST00000556294 238 ntBASIC-2.13□□□□□ -2.75
SCAPERQ9BY12 MIR548AY-201ENST00000617669 107 ntBASIC-2.13□□□□□ -2.75
SCAPERQ9BY12 RNU6-318P-201ENST00000384283 103 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 MIR617-201ENST00000385030 97 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 TRAJ51-201ENST00000504127 63 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 RNU2-31P-201ENST00000516954 155 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 MIR4273-201ENST00000582824 84 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 RN7SKP299-201ENST00000606679 301 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 AC019193.3-201ENST00000609144 554 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 AP001506.1-201ENST00000615444 211 ntBASIC-2.14□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 SNORD18.1-201ENST00000363807 70 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 MIR190B-201ENST00000401119 79 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 MIR548H1-201ENST00000408610 102 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 RNU7-79P-201ENST00000516082 62 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 RNU6-693P-201ENST00000516134 107 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 AP000240.1-201ENST00000609910 452 ntBASIC-2.15□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 RNY1P2-201ENST00000364820 117 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 RNU6-429P-201ENST00000384582 108 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 SNORA49-201ENST00000386157 136 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 RNU2-14P-201ENST00000411053 191 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 SNORD2-201ENST00000459163 69 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 RNU7-149P-201ENST00000516739 59 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 RNU6-759P-201ENST00000516740 103 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 AC060780.3-201ENST00000589464 80 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 AL121655.1-201ENST00000605811 308 ntBASIC-2.16□□□□□ -2.75
SCAPERQ9BY12 SNORD12B-201ENST00000410433 91 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms