Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.24-201ENST00000362508 103 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.66-201ENST00000362862 102 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.84-201ENST00000363011 104 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.128-201ENST00000363391 112 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.153-201ENST00000363615 91 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.210-201ENST00000364161 110 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.431-201ENST00000384086 102 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 MIR526A2-201ENST00000390198 65 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 RNU6-651P-201ENST00000411040 105 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 AC087499.4-201ENST00000448505 178 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 RNU7-73P-201ENST00000458743 63 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.721-201ENST00000517207 102 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 AC131281.1-201ENST00000522984 164 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 AC020661.2-201ENST00000560114 134 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.25□□□□□ -2.37
RPAP1Q9BWH6 MIR367-201ENST00000362299 68 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.14-201ENST00000362415 103 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 RNU6-888P-201ENST00000363010 101 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.117-201ENST00000363294 101 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.158-201ENST00000363651 101 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 RNU6-211P-201ENST00000384047 107 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.455-201ENST00000384230 98 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 SNORA27-201ENST00000384323 126 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 MIR626-201ENST00000385032 94 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 SNORD12C-201ENST00000386307 89 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 MT-TT-201ENST00000387460 66 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 RNU6-602P-201ENST00000411155 105 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 SNRPGP8-201ENST00000454064 226 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 SNORA25.12-201ENST00000516202 82 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 RNU6-988P-201ENST00000519081 107 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 MIR4680-201ENST00000580906 66 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 AC134503.1-201ENST00000633048 54 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 MIR376A2-201ENST00000636782 80 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 AC010332.2-201ENST00000613083 1904 ntBASIC0.24□□□□□ -2.37
RPAP1Q9BWH6 UBE2WP1-201ENST00000362030 340 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.91-201ENST00000363042 107 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 RNU6-1309P-201ENST00000363305 108 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 snoU2_19.4-201ENST00000364329 80 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.229-201ENST00000364347 113 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.276-201ENST00000364732 109 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.535-201ENST00000384612 99 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 MIR588-201ENST00000384900 83 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 AL138752.1-201ENST00000452964 351 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 MIR18B-201ENST00000454574 71 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 SNORA40.15-201ENST00000516884 107 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 SCARNA24.2-201ENST00000516968 130 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 RNU6-1270P-201ENST00000517128 108 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 AC100767.1-201ENST00000528178 123 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 MIR3171-201ENST00000584270 74 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.23□□□□□ -2.37
RPAP1Q9BWH6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 SNORA25.1-201ENST00000362326 128 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.152-201ENST00000363578 100 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 SNORD24-201ENST00000383884 75 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 RNU6-484P-201ENST00000384016 107 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 MIR563-201ENST00000385080 79 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 MTND4LP11-201ENST00000422184 280 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 snoU13.2-201ENST00000459201 104 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 RPS29P24-201ENST00000486345 171 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 RNU6-1338P-201ENST00000516328 91 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 RNU6-453P-201ENST00000516819 85 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 RNU6-365P-201ENST00000517113 106 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 Y_RNA.802-201ENST00000614892 130 ntBASIC0.22□□□□□ -2.37
RPAP1Q9BWH6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.61-201ENST00000362835 102 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-597P-201ENST00000365620 102 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 SNORA1-201ENST00000384107 130 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.440-201ENST00000384120 114 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-364P-201ENST00000384387 107 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-1289P-201ENST00000384431 106 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 MIR125B2-201ENST00000385128 89 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-1319P-201ENST00000390855 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-747P-201ENST00000390928 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-241P-201ENST00000391148 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 SNORA26.6-201ENST00000391256 115 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 MIR548P-201ENST00000408336 84 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 SNORD100-201ENST00000408573 76 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-447P-201ENST00000410293 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-355P-201ENST00000410427 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-791P-201ENST00000410467 104 ntBASIC0.21□□□□□ -2.38
RPAP1Q9BWH6 RNU6-705P-201ENST00000410601 104 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms