Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU7-21P-201ENST00000459430 62 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNA5SP272-201ENST00000516095 111 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 RNU4-71P-201ENST00000516258 113 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 Y_RNA.674-201ENST00000516362 113 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MTND5P41-201ENST00000517498 206 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.66□□□□□ -2.3
CDX2Q99626 MIR4724-201ENST00000579485 89 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MIR4762-201ENST00000585261 75 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 AC008507.4-201ENST00000585464 127 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 AC004792.1-201ENST00000614523 137 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MIR3658-201ENST00000636291 56 ntBASIC0.66□□□□□ -2.3
CDX2Q99626 MIR367-201ENST00000362299 68 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 Y_RNA.182-201ENST00000363880 111 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 Y_RNA.262-201ENST00000364641 102 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 RNU6-1130P-201ENST00000365434 107 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 SNORD61-201ENST00000384252 73 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 SNORA80D-201ENST00000384488 135 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 MIR526A2-201ENST00000390198 65 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 SNORA75.2-201ENST00000391138 150 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 SNORA75.3-201ENST00000391231 150 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 SEPT7P4-201ENST00000437076 306 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.65□□□□□ -2.31
CDX2Q99626 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.65□□□□□ -2.31
CDX2Q99626 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 RNU7-25P-201ENST00000516544 62 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 RNU7-116P-201ENST00000516940 62 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 RNU6-1270P-201ENST00000517128 108 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 RNU7-181P-201ENST00000517234 74 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC120024.3-201ENST00000603167 156 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 Pinc.1-201ENST00000616452 154 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 uc_338.4-201ENST00000616635 176 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 AC027279.3-201ENST00000625055 122 ntBASIC0.65□□□□□ -2.31
CDX2Q99626 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 Y_RNA.233-201ENST00000364407 101 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 Y_RNA.336-201ENST00000365307 109 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU4-17P-201ENST00000365598 141 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-144P-201ENST00000383951 107 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-804P-201ENST00000384286 107 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-163P-201ENST00000384396 106 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 Y_RNA.552-201ENST00000384665 112 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 MIR518F-201ENST00000384973 87 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 MIR616-201ENST00000385293 97 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-578P-201ENST00000390980 103 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-1248P-201ENST00000391096 64 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-1135P-201ENST00000411083 103 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 AF228730.3-201ENST00000436691 102 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RN7SKP164-201ENST00000516138 266 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 SNORD77.4-201ENST00000516158 81 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 SNORD111.1-201ENST00000516421 86 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 SNORD36C-201ENST00000516733 66 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 RNU6-255P-201ENST00000516957 105 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 SNORA81.3-201ENST00000517283 198 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 MRPS18CP4-201ENST00000535821 231 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 AC021753.1-201ENST00000635724 168 ntBASIC0.64□□□□□ -2.31
CDX2Q99626 Y_RNA.7-201ENST00000362352 102 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 RNU6-1082P-201ENST00000364574 107 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 Y_RNA.634-201ENST00000364811 113 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 Y_RNA.547-201ENST00000384654 119 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 RNU6-131P-201ENST00000391144 107 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 Y_RNA.793-201ENST00000411222 111 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 CYCTP-201ENST00000504253 315 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.63□□□□□ -2.31
CDX2Q99626 RNU7-41P-201ENST00000515917 61 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 RNU6-346P-201ENST00000516288 111 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 RNU6-794P-201ENST00000517261 64 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 AP002392.1-201ENST00000537692 208 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 MIR4744-201ENST00000581563 82 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 MIR548AR-201ENST00000582191 57 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CDX2Q99626 AC067863.3-201ENST00000624172 122 ntBASIC0.63□□□□□ -2.31
CDX2Q99626 Y_RNA.8-201ENST00000362353 102 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-1020P-201ENST00000363684 107 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-978P-201ENST00000364371 103 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-886P-201ENST00000384319 105 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-768P-201ENST00000384683 107 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 MIR15B-201ENST00000385045 98 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 SNORD77.3-201ENST00000391113 65 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 MIR891A-201ENST00000401237 79 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-1190P-201ENST00000410811 104 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 AL121914.1-201ENST00000450188 156 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 Y_RNA.797-201ENST00000515977 94 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU4-57P-201ENST00000515980 135 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-693P-201ENST00000516134 107 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms