Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
CDCA3Q99618 MIR3149-201ENST00000584629 83 ntBASIC0.88□□□□□ -2.27
CDCA3Q99618 Y_RNA.193-201ENST00000363979 102 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 RNU6-923P-201ENST00000364753 107 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 SNORA20.1-201ENST00000364790 130 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 SNORA27-201ENST00000384323 126 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 Y_RNA.478-201ENST00000384358 107 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 RNA5SP95-201ENST00000410319 137 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 Y_RNA.626-201ENST00000411288 95 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
CDCA3Q99618 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 AC133485.1-201ENST00000567176 124 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 AC138907.6-201ENST00000568401 126 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 MIR4744-201ENST00000581563 82 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 7SK.10-201ENST00000621414 298 ntBASIC0.87□□□□□ -2.27
CDCA3Q99618 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.86□□□□□ -2.27
CDCA3Q99618 Y_RNA.23-201ENST00000362496 106 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 Y_RNA.60-201ENST00000362831 98 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 RNU6-103P-201ENST00000363686 107 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 Y_RNA.307-201ENST00000365022 117 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 SNORA24-201ENST00000384096 131 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 SNORA1-201ENST00000384107 130 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 Y_RNA.447-201ENST00000384184 113 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 Y_RNA.452-201ENST00000384202 108 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 RNU6-463P-201ENST00000384340 107 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 SNORA79-201ENST00000408376 140 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.86□□□□□ -2.27
CDCA3Q99618 AL121914.1-201ENST00000450188 156 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 snoU13.16-201ENST00000459350 104 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 MIR2115-201ENST00000516657 100 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 RNU6-197P-201ENST00000516680 100 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 AP000942.4-201ENST00000604811 241 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 RNU2-4P-201ENST00000606190 192 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
CDCA3Q99618 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CDCA3Q99618 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 SNORD58.1-201ENST00000391313 66 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 SNORD111-201ENST00000408139 94 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 AL138752.1-201ENST00000452964 351 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 RNU6-1023P-201ENST00000516137 106 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 RNU6-111P-201ENST00000517179 105 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 AC097639.2-201ENST00000603159 172 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 AL162730.1-201ENST00000605734 292 ntBASIC0.85□□□□□ -2.27
CDCA3Q99618 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 Y_RNA.7-201ENST00000362352 102 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 RNU6-1189P-201ENST00000383958 107 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 Y_RNA.410-201ENST00000383992 113 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 RNU6-578P-201ENST00000390980 103 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 SNORD77.3-201ENST00000391113 65 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 RNU6-613P-201ENST00000410412 108 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 RPS29P24-201ENST00000486345 171 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 Y_RNA.797-201ENST00000515977 94 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 MIR1273G-201ENST00000577677 100 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 RNU6-94P-201ENST00000607728 107 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
CDCA3Q99618 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CDCA3Q99618 MIR342-201ENST00000362212 99 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 Y_RNA.144-201ENST00000363521 113 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 RNU6-125P-201ENST00000384505 107 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CDCA3Q99618 RNU6-913P-201ENST00000390913 95 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 AC090844.1-201ENST00000422019 156 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 RNU4-71P-201ENST00000516258 113 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.83□□□□□ -2.28
CDCA3Q99618 MIR4308-201ENST00000580634 81 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 MIR3129-201ENST00000581095 76 ntBASIC0.83□□□□□ -2.28
CDCA3Q99618 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 Y_RNA.440-201ENST00000384120 114 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 RNU6-994P-201ENST00000410507 111 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 RNU7-53P-201ENST00000516705 60 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 MIR8055-201ENST00000610739 97 ntBASIC0.82□□□□□ -2.28
CDCA3Q99618 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDCA3Q99618 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDCA3Q99618 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 RNU4-43P-201ENST00000410628 137 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 AC244023.1-201ENST00000426884 112 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA3Q99618 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CDCA3Q99618 RNU2-11P-201ENST00000459191 187 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.81□□□□□ -2.28
CDCA3Q99618 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 AC242498.1-201ENST00000604134 111 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
CDCA3Q99618 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
CDCA3Q99618 RNA5SP457-201ENST00000363657 124 ntBASIC0.8□□□□□ -2.28
CDCA3Q99618 Y_RNA.168-201ENST00000363740 102 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms