Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC024995.1-201ENST00000523014 93 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.16□□□□□ -2.06
CDK5RAP1Q96SZ6 RNU6-363P-201ENST00000362895 105 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-19-201ENST00000363098 82 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-18-201ENST00000363293 82 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-17-201ENST00000364612 82 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORA4.2-201ENST00000365313 147 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-409P-201ENST00000384114 104 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP482-201ENST00000391269 118 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 AC069257.2-201ENST00000441819 155 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 RPL39P39-201ENST00000455840 151 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP395-201ENST00000516567 118 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR4694-201ENST00000578534 80 ntBASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDK5RAP1Q96SZ6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-661P-201ENST00000362409 107 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.454-201ENST00000384224 113 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 AL627390.1-201ENST00000396055 340 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 AL022718.1-201ENST00000412004 84 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 AL035398.1-201ENST00000430869 322 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 AC015922.2-201ENST00000435593 184 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 UBL5P3-201ENST00000475112 231 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR548AE2-201ENST00000583456 67 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 IGLL4P-201ENST00000614590 133 ntBASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDK5RAP1Q96SZ6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.221-201ENST00000364248 96 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-60P-201ENST00000364792 103 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD38C-201ENST00000384381 69 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 AC093850.1-201ENST00000454121 251 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR3126-201ENST00000577443 74 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.247-201ENST00000364500 92 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.313-201ENST00000365095 103 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-1276P-201ENST00000365372 104 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORA32-201ENST00000384072 121 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR597-201ENST00000384968 97 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 MRPL35P3-201ENST00000421557 364 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU7-113P-201ENST00000459273 62 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR4778-201ENST00000577635 80 ntBASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR515-2-201ENST00000384883 83 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR515-1-201ENST00000384884 83 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD28B-201ENST00000390993 75 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-1307P-201ENST00000391012 103 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.659-201ENST00000515994 113 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-521P-201ENST00000516663 105 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-958P-201ENST00000516995 106 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-34-201ENST00000362441 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-12-201ENST00000362583 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-29-201ENST00000362834 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-9-201ENST00000362912 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-21-201ENST00000362963 81 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-14-201ENST00000363090 81 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-13-201ENST00000363358 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-41-201ENST00000363608 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-11-201ENST00000363616 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-5-201ENST00000363633 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-39-201ENST00000363694 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-4-201ENST00000363810 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-16-201ENST00000363887 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-6-201ENST00000363942 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-42-201ENST00000364273 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.244-201ENST00000364484 109 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-219P-201ENST00000364728 107 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-15-201ENST00000364809 81 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-1-201ENST00000364961 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-26-201ENST00000365067 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-10-201ENST00000365073 81 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-35-201ENST00000365122 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-43-201ENST00000365503 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORD115-36-201ENST00000365629 82 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-1201P-201ENST00000384227 107 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 AL451046.2-201ENST00000403074 277 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU4-69P-201ENST00000410677 143 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU7-34P-201ENST00000459394 64 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU7-96P-201ENST00000459535 64 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP168-201ENST00000516642 112 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 RNA5SP33-201ENST00000516687 98 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR4791-201ENST00000607666 84 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms