Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 SNORD81.1-201ENST00000363064 77 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 RNU6-509P-201ENST00000363519 107 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 RNA5SP403-201ENST00000363598 108 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 SNORD95.1-201ENST00000364099 68 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 RNY3P11-201ENST00000364153 102 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 RNU6-455P-201ENST00000384681 107 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 AC019235.1-201ENST00000503847 207 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 AC100767.1-201ENST00000528178 123 ntBASIC-0.85□□□□□ -2.55
LYSMD1Q96S90 RNU6-865P-201ENST00000364772 107 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 SNORA20-201ENST00000384662 132 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 RNA5SP25-201ENST00000410815 110 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 RPS3AP52-201ENST00000435639 297 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 RNU6-120P-201ENST00000516077 103 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 AC005899.2-201ENST00000584353 90 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 PISRT1.1-201ENST00000616930 107 ntBASIC-0.86□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 SNORD24-201ENST00000383884 75 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 MIR204-201ENST00000385200 110 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 DEFB108C-201ENST00000400154 252 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 MIR548F5-201ENST00000408421 86 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 AC074198.2-201ENST00000508153 258 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 RNU7-110P-201ENST00000516891 62 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 MIR4662B-201ENST00000579498 81 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 U6.92-201ENST00000636464 89 ntBASIC-0.87□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-888P-201ENST00000363010 101 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU4-80P-201ENST00000363200 141 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-801P-201ENST00000364087 105 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-259P-201ENST00000383999 107 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 MIR628-201ENST00000385229 95 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 AL160004.2-201ENST00000432935 350 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 SNORD77.4-201ENST00000516158 81 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-307P-201ENST00000516743 106 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 RNU6-365P-201ENST00000517113 106 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 AL021707.8-201ENST00000609428 183 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 TPTEP1-208ENST00000636884 213 ntBASIC-0.88□□□□□ -2.55
LYSMD1Q96S90 SNORA22.1-201ENST00000362701 134 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 RNU6-593P-201ENST00000364716 112 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 RNU6-373P-201ENST00000411247 98 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 AC063944.3-201ENST00000609969 533 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 AC090582.1-201ENST00000636321 199 ntBASIC-0.89□□□□□ -2.55
LYSMD1Q96S90 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 MTND2P9-201ENST00000422293 931 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 RNU6-138P-201ENST00000515952 107 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 RNU6-415P-201ENST00000516252 97 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 AC099654.14-201ENST00000638599 341 ntBASIC-0.9□□□□□ -2.55
LYSMD1Q96S90 MIR367-201ENST00000362299 68 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 RNU6-899P-201ENST00000363947 107 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 MIR635-201ENST00000384830 98 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 AC021146.6-201ENST00000514659 117 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 AC144568.1-201ENST00000520139 137 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 MIR3681-201ENST00000580089 72 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 MIR3611-201ENST00000584484 83 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 AC091932.4-201ENST00000623386 200 ntBASIC-0.91□□□□□ -2.56
LYSMD1Q96S90 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNY1P2-201ENST00000364820 117 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU4-70P-201ENST00000384579 139 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU6-901P-201ENST00000384593 106 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 MIR599-201ENST00000385069 95 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.92□□□□□ -2.56
LYSMD1Q96S90 IGKV1-22-201ENST00000524313 326 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms