Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR30D-201ENST00000362283 70 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 RNU6-770P-201ENST00000363929 105 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 SNORA8.3-201ENST00000384679 139 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 ELOCP20-201ENST00000422460 345 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
VPS35Q96QK1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 RNA5SP117-201ENST00000365294 118 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 SNORA26-201ENST00000391286 122 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS35Q96QK1 RNY3P15-201ENST00000516297 97 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 RNU6-448P-201ENST00000517052 107 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 RNU6-988P-201ENST00000519081 107 ntBASIC0.2□□□□□ -2.38
VPS35Q96QK1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS35Q96QK1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS35Q96QK1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 RNY1P4-201ENST00000384595 115 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 MIR193B-201ENST00000384907 83 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS35Q96QK1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 AC131281.1-201ENST00000522984 164 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 MIR7111-201ENST00000619751 72 ntBASIC0.19□□□□□ -2.38
VPS35Q96QK1 UBE2WP1-201ENST00000362030 340 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 MIR342-201ENST00000362212 99 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 RNU6-806P-201ENST00000365147 105 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 SNORA8.2-201ENST00000384372 139 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.18□□□□□ -2.38
VPS35Q96QK1 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 MIR3678-201ENST00000578455 94 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
VPS35Q96QK1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 RNU6-484P-201ENST00000384016 107 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 RNU6-211P-201ENST00000384047 107 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 RNU6-474P-201ENST00000384243 107 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 RNU2-55P-201ENST00000411146 174 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
VPS35Q96QK1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS35Q96QK1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 Y_RNA.509-201ENST00000384506 99 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 MIR626-201ENST00000385032 94 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 SERF1AP1-201ENST00000514575 187 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 MIR6717-201ENST00000622747 73 ntBASIC0.16□□□□□ -2.38
VPS35Q96QK1 MIR302B-201ENST00000362188 73 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 SNORA26.6-201ENST00000391256 115 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 SNORD93-201ENST00000408813 74 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 RNU4-83P-201ENST00000410863 133 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 RNU6-1143P-201ENST00000516125 104 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 RNA5SP153-201ENST00000516498 76 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 AC113195.1-201ENST00000579952 141 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 AL160413.1-201ENST00000622780 310 ntBASIC0.15□□□□□ -2.39
VPS35Q96QK1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 RNU6-1289P-201ENST00000384431 106 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 RPL39P25-201ENST00000449384 154 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 RNU7-45P-201ENST00000459460 63 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 MIR1273G-201ENST00000577677 100 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 AC097639.2-201ENST00000603159 172 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 AP001282.2-201ENST00000616149 309 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 MIR8066-201ENST00000617280 78 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 MTND4P29-201ENST00000503122 1372 ntBASIC0.14□□□□□ -2.39
VPS35Q96QK1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 RNU6-653P-201ENST00000363074 106 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 SNORA22B-201ENST00000383876 138 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 RNY3P5-201ENST00000384127 102 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 RNA5SP237-201ENST00000410414 113 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 RNA5SP261-201ENST00000410536 106 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms