Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 AL512326.2-201ENST00000426359 151 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 AC112487.2-201ENST00000637950 304 ntBASIC-0.02□□□□□ -2.41
RPRD1AQ96P16 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 RNU4-10P-201ENST00000364383 140 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 RNY3P1-201ENST00000365085 102 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 MIR526A2-201ENST00000390198 65 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 SNORA26.6-201ENST00000391256 115 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 RNU6-469P-201ENST00000516253 101 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 RNA5SP268-201ENST00000516828 124 ntBASIC-0.03□□□□□ -2.41
RPRD1AQ96P16 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 AC069271.1-201ENST00000445577 156 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 RNU6-875P-201ENST00000516488 106 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 RNU6-504P-201ENST00000516568 104 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 RNU6-126P-201ENST00000516685 103 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 RNU6-897P-201ENST00000517135 105 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 AP003733.2-201ENST00000529409 171 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 AL008718.3-201ENST00000610217 321 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 MIR7107-201ENST00000611489 80 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 MIR6755-201ENST00000619993 66 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 MIR6717-201ENST00000622747 73 ntBASIC-0.04□□□□□ -2.42
RPRD1AQ96P16 MIR342-201ENST00000362212 99 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 RNU6-662P-201ENST00000384253 104 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 RNU7-45P-201ENST00000459460 63 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 RNU6-507P-201ENST00000516045 100 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 AC090574.1-201ENST00000623186 233 ntBASIC-0.05□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 RNU6-290P-201ENST00000365212 101 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 RNU6-597P-201ENST00000365620 102 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 RNU6-121P-201ENST00000410525 99 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 AC104408.1-201ENST00000605241 170 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 AL662814.1-201ENST00000617364 121 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 uc_338.22-201ENST00000622722 187 ntBASIC-0.06□□□□□ -2.42
RPRD1AQ96P16 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 SNORA9.1-201ENST00000362412 131 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 RNA5SP257-201ENST00000363023 116 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 SNORA63.7-201ENST00000365579 123 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 PCNPP3-201ENST00000393579 471 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 RPL39P25-201ENST00000449384 154 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPRD1AQ96P16 SNORA25.1-201ENST00000362326 128 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 RNA5SP237-201ENST00000410414 113 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 SUMO1P3-201ENST00000439961 304 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 MTND4P19-201ENST00000446659 478 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 MTND4LP30-201ENST00000454092 297 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 SNORA31.14-201ENST00000516728 116 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 AC006006.1-201ENST00000603082 144 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 MIR6082-201ENST00000613604 109 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 snoU18.1-201ENST00000629629 71 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 MIR6828-201ENST00000636181 60 ntBASIC-0.08□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 RNU6-653P-201ENST00000363074 106 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 RNU6-403P-201ENST00000363163 104 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 RNU6-450P-201ENST00000364654 107 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 U8.15-201ENST00000390947 134 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 MIR5688-201ENST00000580619 83 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 AC067863.3-201ENST00000624172 122 ntBASIC-0.09□□□□□ -2.42
RPRD1AQ96P16 MIR302B-201ENST00000362188 73 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 RNU6-326P-201ENST00000365480 107 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 RNU6-484P-201ENST00000384016 107 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 RNU6-187P-201ENST00000384139 106 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms