Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 SNORD115-2-201ENST00000362842 82 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 SNORD115-20-201ENST00000365099 82 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.430-201ENST00000384081 110 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 RNU6-816P-201ENST00000390914 107 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 MIR1912-201ENST00000410389 80 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 RNU4-69P-201ENST00000410677 143 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 snoU13.16-201ENST00000459350 104 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 MIR4764-201ENST00000580680 88 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 AC104984.5-201ENST00000586878 94 ntBASIC2.1□□□□□ -2.07
PTCHD1Q96NR3 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 AL023284.1-201ENST00000403956 276 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 AC113410.1-201ENST00000505029 247 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 AC008133.2-201ENST00000624540 351 ntBASIC2.09□□□□□ -2.07
PTCHD1Q96NR3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PTCHD1Q96NR3 SNORD115-19-201ENST00000363098 82 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 SNORD115-18-201ENST00000363293 82 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 SNORD115-17-201ENST00000364612 82 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 MIR520C-201ENST00000385005 87 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 AL161935.2-201ENST00000414627 60 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 HMGN1P33-201ENST00000432945 451 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 RNU6-322P-201ENST00000516010 103 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 RNA5SP33-201ENST00000516687 98 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 AP001318.4-201ENST00000616637 121 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PTCHD1Q96NR3 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 RNU6-439P-201ENST00000384188 106 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 MIR653-201ENST00000385279 96 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 RPS3AP1-201ENST00000413190 320 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 AC141557.1-201ENST00000540982 400 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 MIR1255B1-201ENST00000636325 63 ntBASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCHD1Q96NR3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 SNORA1.1-201ENST00000364671 133 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 RNA5SP259-201ENST00000365541 109 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 RNU6-905P-201ENST00000384434 107 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.544-201ENST00000384650 113 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 MIR590-201ENST00000385008 97 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 SNORA19.1-201ENST00000410656 129 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 MIR548AE2-201ENST00000583456 67 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 MIR8055-201ENST00000610739 97 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
PTCHD1Q96NR3 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 SNORD77B-201ENST00000391112 67 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 AL451046.2-201ENST00000403074 277 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 RNY4P30-201ENST00000410216 95 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 MIR5582-201ENST00000579697 68 ntBASIC2.05□□□□□ -2.08
PTCHD1Q96NR3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 RNU6-640P-201ENST00000363693 105 ntBASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 RNU6-904P-201ENST00000516206 101 ntBASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PTCHD1Q96NR3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 RNU6-363P-201ENST00000362895 105 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 RNU6-109P-201ENST00000516364 107 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 SNORA40.13-201ENST00000516379 120 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 RNU6-184P-201ENST00000516514 107 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 AC022254.1-201ENST00000567857 235 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 AC006254.2-201ENST00000603259 279 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 Z97988.1-201ENST00000637697 135 ntBASIC2.03□□□□□ -2.08
PTCHD1Q96NR3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms