Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC091932.4-201ENST00000623386 200 ntBASIC1.52□□□□□ -2.17
CDK5RAP3Q96JB5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.251-201ENST00000364551 99 ntBASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 RNU1-133P-201ENST00000364867 167 ntBASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-913P-201ENST00000390913 95 ntBASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-482P-201ENST00000391068 107 ntBASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 RNU7-73P-201ENST00000458743 63 ntBASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDK5RAP3Q96JB5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 MIR103A2-201ENST00000362154 78 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 SNORD18B-201ENST00000365659 72 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-460P-201ENST00000391158 108 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 RNU7-197P-201ENST00000458836 62 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-346P-201ENST00000516288 111 ntBASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.506-201ENST00000384494 102 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 MIR569-201ENST00000385228 96 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 MTATP6P21-201ENST00000440681 189 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 SNORA31.4-201ENST00000516049 129 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
CDK5RAP3Q96JB5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-774P-201ENST00000363238 107 ntBASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 RNA5SP236-201ENST00000516169 116 ntBASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.686-201ENST00000516548 134 ntBASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 RNU2-60P-201ENST00000517290 128 ntBASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 AP003716.2-201ENST00000528260 108 ntBASIC1.48□□□□□ -2.17
CDK5RAP3Q96JB5 Y_RNA.120-201ENST00000363304 110 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNY1P5-201ENST00000383890 115 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 SNORA20-201ENST00000384662 132 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 MIR1185-1-201ENST00000408598 86 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 HMGN1P33-201ENST00000432945 451 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNU7-45P-201ENST00000459460 63 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNA5SP272-201ENST00000516095 111 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 AP000942.3-201ENST00000603702 160 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 AL020996.3-201ENST00000606617 222 ntBASIC1.47□□□□□ -2.17
CDK5RAP3Q96JB5 RNU6-125P-201ENST00000384505 107 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-1190P-201ENST00000410811 104 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-426P-201ENST00000516464 97 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 MIR3133-201ENST00000583157 78 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
CDK5RAP3Q96JB5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA1.1-201ENST00000364671 133 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.343-201ENST00000365354 112 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.420-201ENST00000384043 110 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 RNU5E-3P-201ENST00000515913 68 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 RNU7-40P-201ENST00000516397 64 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.690-201ENST00000516603 95 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 MIR8055-201ENST00000610739 97 ntBASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.45□□□□□ -2.18
CDK5RAP3Q96JB5 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-508P-201ENST00000363231 103 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-915P-201ENST00000364943 103 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-396P-201ENST00000365369 105 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 AC090844.1-201ENST00000422019 156 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 AL392103.1-201ENST00000447000 198 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 AC004223.1-201ENST00000479840 271 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.703-201ENST00000516846 111 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.44□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-309P-201ENST00000364573 106 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 RNU4-16P-201ENST00000364737 141 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 RNY1P6-201ENST00000384193 109 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA75.2-201ENST00000391138 150 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA75.3-201ENST00000391231 150 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 AL603914.1-201ENST00000401964 204 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 RNU11-2P-201ENST00000516898 142 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 AP001328.1-201ENST00000528550 176 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 MIR4769-201ENST00000584126 77 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 AL022345.2-201ENST00000606307 135 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 MIR6717-201ENST00000622747 73 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 MIR6516-201ENST00000630554 81 ntBASIC1.43□□□□□ -2.18
CDK5RAP3Q96JB5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-746P-201ENST00000384112 109 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 MIR548M-201ENST00000408260 86 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms