Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-818P-201ENST00000364837 108 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 RNU6-804P-201ENST00000384286 107 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 MIR570-201ENST00000384917 97 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.580-201ENST00000391004 95 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 RNU7-67P-201ENST00000459003 62 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 RPS29P1-201ENST00000465274 159 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 MIR4791-201ENST00000607666 84 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 AL096861.1-201ENST00000610899 123 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 MTND1P7-201ENST00000632801 297 ntBASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM43Q96BQ3 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 MIR548I3-201ENST00000408378 149 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 MIR548I1-201ENST00000408810 149 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 RPS29P29-201ENST00000456396 171 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 RPS29P24-201ENST00000486345 171 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 RNU7-41P-201ENST00000515917 61 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 AC243994.1-201ENST00000618627 109 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 MIR8065-201ENST00000620577 100 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 MIR4251-201ENST00000635819 61 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 MIR3658-201ENST00000636291 56 ntBASIC1.53□□□□□ -2.16
TRIM43Q96BQ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
TRIM43Q96BQ3 RNU6-151P-201ENST00000364158 107 ntBASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 RNU7-96P-201ENST00000459535 64 ntBASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 RNU7-70P-201ENST00000516941 66 ntBASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TRIM43Q96BQ3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU4-11P-201ENST00000365287 132 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU6-1130P-201ENST00000365434 107 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.398-201ENST00000383952 99 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU6-588P-201ENST00000410281 105 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU7-80P-201ENST00000459562 61 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU2-13P-201ENST00000515909 113 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 MIR3192-201ENST00000584920 77 ntBASIC1.51□□□□□ -2.17
TRIM43Q96BQ3 MIR342-201ENST00000362212 99 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 RNU6-342P-201ENST00000384521 104 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 AC112693.2-201ENST00000556538 232 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 MIR376A2-201ENST00000636782 80 ntBASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM43Q96BQ3 MIR302B-201ENST00000362188 73 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 AL133373.1-201ENST00000497098 94 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 RNU6-958P-201ENST00000516995 106 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 AC131055.1-201ENST00000584626 316 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 AC021753.1-201ENST00000635724 168 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 MIR6767-201ENST00000637302 66 ntBASIC1.49□□□□□ -2.17
TRIM43Q96BQ3 SNORA24-201ENST00000384096 131 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 AL035398.1-201ENST00000430869 322 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 RNU6-998P-201ENST00000515894 101 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 RNU6-1212P-201ENST00000517023 104 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.48□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 MIR598-201ENST00000384868 97 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 MIR513C-201ENST00000401352 84 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 snoU13.16-201ENST00000459350 104 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 SNORA31.2-201ENST00000516019 134 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 SNORA31.4-201ENST00000516049 129 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 MIR6788-201ENST00000618842 66 ntBASIC1.47□□□□□ -2.17
TRIM43Q96BQ3 MTND5P32-201ENST00000560711 1802 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.400-201ENST00000383963 111 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 SNORA40.6-201ENST00000391153 128 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 MIR548J-201ENST00000408833 112 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 AC245047.7-201ENST00000440265 293 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 RNU7-73P-201ENST00000458743 63 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 RNU2-11P-201ENST00000459191 187 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 MTND5P41-201ENST00000517498 206 ntBASIC1.46□□□□□ -2.18
TRIM43Q96BQ3 AL596211.1-201ENST00000569873 2277 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 MIR103A2-201ENST00000362154 78 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.170-201ENST00000363746 110 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 RNU1-133P-201ENST00000364867 167 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 SNORD18B-201ENST00000365659 72 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.497-201ENST00000384447 98 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 MTATP6P21-201ENST00000440681 189 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms