Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 U2.14-201ENST00000615943 113 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SKA1Q96BD8 Y_RNA.11-201ENST00000362375 109 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 Y_RNA.66-201ENST00000362862 102 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 Y_RNA.237-201ENST00000364439 102 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 RNU6-740P-201ENST00000364734 105 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 RNU6-1227P-201ENST00000383981 107 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 MIR548I3-201ENST00000408378 149 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 AF228730.3-201ENST00000436691 102 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 RNU6-998P-201ENST00000515894 101 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 AP001282.2-201ENST00000616149 309 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 AC010487.4-201ENST00000637027 61 ntBASIC0.63□□□□□ -2.31
SKA1Q96BD8 Y_RNA.82-201ENST00000363000 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.92-201ENST00000363043 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.235-201ENST00000364412 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.306-201ENST00000365015 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.312-201ENST00000365089 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.322-201ENST00000365151 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 RNU6-484P-201ENST00000384016 107 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 MIR616-201ENST00000385293 97 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 RNU6-1228P-201ENST00000391014 107 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 MIR938-201ENST00000401216 83 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 SNORD2.1-201ENST00000458762 69 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.650-201ENST00000459002 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.679-201ENST00000516416 91 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.777-201ENST00000516982 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.771-201ENST00000598668 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 Y_RNA.789-201ENST00000622480 102 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SKA1Q96BD8 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
SKA1Q96BD8 MIR335-201ENST00000362173 94 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 Y_RNA.7-201ENST00000362352 102 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 Y_RNA.91-201ENST00000363042 107 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 Y_RNA.199-201ENST00000364014 102 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 Y_RNA.622-201ENST00000411091 108 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 HMGN1P33-201ENST00000432945 451 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 AL138752.1-201ENST00000452964 351 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 AC097639.2-201ENST00000603159 172 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 MIR6740-201ENST00000618268 113 ntBASIC0.61□□□□□ -2.31
SKA1Q96BD8 MIR302B-201ENST00000362188 73 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 RNU6-1309P-201ENST00000363305 108 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 AL606845.1-201ENST00000404881 255 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 RNA5SP261-201ENST00000410536 106 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 RNU6-602P-201ENST00000411155 105 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 snoU13.2-201ENST00000459201 104 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.6□□□□□ -2.31
SKA1Q96BD8 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 AC020891.4-201ENST00000605745 93 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 AL589743.1-201ENST00000551932 2712 ntBASIC0.6□□□□□ -2.31
SKA1Q96BD8 Y_RNA.440-201ENST00000384120 114 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 MT-TT-201ENST00000387460 66 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 SNORA79-201ENST00000408376 140 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 MIR1302-6-201ENST00000408466 90 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 MIR1257-201ENST00000408490 117 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 SNRPGP8-201ENST00000454064 226 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 RNU6-635P-201ENST00000516651 102 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
SKA1Q96BD8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
SKA1Q96BD8 MIR342-201ENST00000362212 99 ntBASIC0.58□□□□□ -2.32
SKA1Q96BD8 RNA5SP325-201ENST00000363756 130 ntBASIC0.58□□□□□ -2.32
SKA1Q96BD8 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
SKA1Q96BD8 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
SKA1Q96BD8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SKA1Q96BD8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SKA1Q96BD8 MIR18A-201ENST00000362310 71 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-747P-201ENST00000390928 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-241P-201ENST00000391148 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-447P-201ENST00000410293 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-355P-201ENST00000410427 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-791P-201ENST00000410467 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-705P-201ENST00000410601 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-860P-201ENST00000410860 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 RNU6-785P-201ENST00000411324 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.57□□□□□ -2.32
SKA1Q96BD8 AL162730.1-201ENST00000605734 292 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 U6.90-201ENST00000614007 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 U6.70-201ENST00000620287 104 ntBASIC0.57□□□□□ -2.32
SKA1Q96BD8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms