Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RNU4-43P-201ENST00000410628 137 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 SNORD116-25-201ENST00000516517 92 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 AP002392.1-201ENST00000537692 208 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 MIR376A2-201ENST00000636782 80 ntBASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SH3KBP1Q96B97 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 Y_RNA.75-201ENST00000362927 97 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 Y_RNA.521-201ENST00000384560 114 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 MIR1302-7-201ENST00000408841 72 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 RNU2-13P-201ENST00000515909 113 ntBASIC1.2□□□□□ -2.22
SH3KBP1Q96B97 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
SH3KBP1Q96B97 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
SH3KBP1Q96B97 RPS29P24-201ENST00000486345 171 ntBASIC1.19□□□□□ -2.22
SH3KBP1Q96B97 AP003716.2-201ENST00000528260 108 ntBASIC1.19□□□□□ -2.22
SH3KBP1Q96B97 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 Y_RNA.410-201ENST00000383992 113 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 Y_RNA.440-201ENST00000384120 114 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 MIR613-201ENST00000385248 95 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 RNU2-11P-201ENST00000459191 187 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 RNU6-861P-201ENST00000516745 106 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 RNA5SP480-201ENST00000516840 109 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 MRPS18CP4-201ENST00000535821 231 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 MIR4661-201ENST00000582720 75 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 MIR6516-201ENST00000630554 81 ntBASIC1.18□□□□□ -2.22
SH3KBP1Q96B97 RNU6-978P-201ENST00000364371 103 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 Y_RNA.351-201ENST00000365436 96 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 RNU6-913P-201ENST00000390913 95 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 AL035398.1-201ENST00000430869 322 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 SEPT14P17-201ENST00000617978 177 ntBASIC1.17□□□□□ -2.22
SH3KBP1Q96B97 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 MIR4431-201ENST00000579990 94 ntBASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SH3KBP1Q96B97 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 MIR302B-201ENST00000362188 73 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 RNU6-396P-201ENST00000365369 105 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 Y_RNA.435-201ENST00000384095 112 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 Y_RNA.542-201ENST00000384641 111 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 RNU6-205P-201ENST00000390858 107 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 AL392103.1-201ENST00000447000 198 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 snoU13.16-201ENST00000459350 104 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 RNU7-45P-201ENST00000459460 63 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 SNORA81.3-201ENST00000517283 198 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 AC072026.1-201ENST00000605023 201 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 AL596211.1-201ENST00000569873 2277 ntBASIC1.15□□□□□ -2.23
SH3KBP1Q96B97 Y_RNA.29-201ENST00000362570 113 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 RNU6-1318P-201ENST00000365389 103 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 SNORA24-201ENST00000384096 131 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 SNORA2B-201ENST00000384583 137 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 RNU6-768P-201ENST00000384683 107 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 RNU7-53P-201ENST00000516705 60 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 AL365205.2-201ENST00000594586 68 ntBASIC1.14□□□□□ -2.23
SH3KBP1Q96B97 SNORA25.7-201ENST00000364375 127 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 RNU6-312P-201ENST00000364629 107 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 Y_RNA.357-201ENST00000365487 109 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 RNU6-125P-201ENST00000384505 107 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 MIR5197-201ENST00000583721 112 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 AC131055.1-201ENST00000584626 316 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 AC004792.1-201ENST00000614523 137 ntBASIC1.13□□□□□ -2.23
SH3KBP1Q96B97 RNA5SP127-201ENST00000411051 133 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 RNU7-96P-201ENST00000459535 64 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 AC074198.2-201ENST00000508153 258 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 AC107027.2-201ENST00000512197 115 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 MIR2115-201ENST00000516657 100 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 RNU7-70P-201ENST00000516941 66 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.12□□□□□ -2.23
SH3KBP1Q96B97 RNU6-682P-201ENST00000363843 106 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 RNU6-1082P-201ENST00000364574 107 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 RNU6-1292P-201ENST00000383856 107 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 MIR942-201ENST00000401111 86 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 MIR548I3-201ENST00000408378 149 ntBASIC1.11□□□□□ -2.23
SH3KBP1Q96B97 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms