Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 RNU6-209P-201ENST00000384118 107 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 Y_RNA.464-201ENST00000384282 110 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 RNU6-998P-201ENST00000515894 101 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.53□□□□□ -2.16
HPS3Q969F9 AC131055.1-201ENST00000584626 316 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HPS3Q969F9 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 SNORD116-18-201ENST00000383961 92 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 RNU6-588P-201ENST00000410281 105 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 RNU7-73P-201ENST00000458743 63 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 MIR3658-201ENST00000636291 56 ntBASIC1.52□□□□□ -2.17
HPS3Q969F9 MIR103A2-201ENST00000362154 78 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 RNU6-151P-201ENST00000364158 107 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 RNU6-804P-201ENST00000384286 107 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 RNU2-11P-201ENST00000459191 187 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 snoU13.18-201ENST00000459483 104 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.51□□□□□ -2.17
HPS3Q969F9 AC068338.1-201ENST00000565567 176 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 MIR376A2-201ENST00000636782 80 ntBASIC1.51□□□□□ -2.17
HPS3Q969F9 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 RNU4-11P-201ENST00000365287 132 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 RNU11-2P-201ENST00000516898 142 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.5□□□□□ -2.17
HPS3Q969F9 AC112693.2-201ENST00000556538 232 ntBASIC1.5□□□□□ -2.17
HPS3Q969F9 RNU1-133P-201ENST00000364867 167 ntBASIC1.49□□□□□ -2.17
HPS3Q969F9 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
HPS3Q969F9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.49□□□□□ -2.17
HPS3Q969F9 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
HPS3Q969F9 AL157834.3-201ENST00000615543 103 ntBASIC1.49□□□□□ -2.17
HPS3Q969F9 MTND5P32-201ENST00000560711 1802 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 SNORD18B-201ENST00000365659 72 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 Y_RNA.398-201ENST00000383952 99 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 RNU6-910P-201ENST00000390844 107 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 MIR513C-201ENST00000401352 84 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 MIR548I3-201ENST00000408378 149 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 MIR548I1-201ENST00000408810 149 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 RNA5SP261-201ENST00000410536 106 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 MTATP6P21-201ENST00000440681 189 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 snoU13.25-201ENST00000458945 104 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.48□□□□□ -2.17
HPS3Q969F9 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.48□□□□□ -2.17
HPS3Q969F9 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 AC091932.4-201ENST00000623386 200 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.48□□□□□ -2.17
HPS3Q969F9 AL596211.1-201ENST00000569873 2277 ntBASIC1.48□□□□□ -2.17
HPS3Q969F9 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 SNORA80D-201ENST00000384488 135 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 MIR1276-201ENST00000408707 83 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 SCARNA15-202ENST00000516881 127 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 AP003716.2-201ENST00000528260 108 ntBASIC1.47□□□□□ -2.17
HPS3Q969F9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 MT-TR-201ENST00000387439 65 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 AL591704.2-201ENST00000421658 181 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 MIR2115-201ENST00000516657 100 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 RNU6-1212P-201ENST00000517023 104 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 AC021753.1-201ENST00000635724 168 ntBASIC1.46□□□□□ -2.18
HPS3Q969F9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HPS3Q969F9 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 Y_RNA.400-201ENST00000383963 111 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 MIR3152-201ENST00000579801 74 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 AL022345.2-201ENST00000606307 135 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 AL353770.2-201ENST00000620024 78 ntBASIC1.45□□□□□ -2.18
HPS3Q969F9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HPS3Q969F9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 SNORA1.1-201ENST00000364671 133 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 RNU6-913P-201ENST00000390913 95 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 SNORD12-201ENST00000391002 90 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 MIR1185-1-201ENST00000408598 86 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.44□□□□□ -2.18
HPS3Q969F9 AL392103.1-201ENST00000447000 198 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
HPS3Q969F9 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
HPS3Q969F9 SNORA20-201ENST00000384662 132 ntBASIC1.43□□□□□ -2.18
HPS3Q969F9 MRPL35P3-201ENST00000421557 364 ntBASIC1.43□□□□□ -2.18
HPS3Q969F9 SNORD79.1-201ENST00000516069 84 ntBASIC1.43□□□□□ -2.18
HPS3Q969F9 AC019288.1-201ENST00000557918 224 ntBASIC1.43□□□□□ -2.18
HPS3Q969F9 MIR548X2-201ENST00000579776 100 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms