Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL603914.1-201ENST00000401964 204 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 AL158147.1-201ENST00000443970 75 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.63□□□□□ -2.15
ATP2A3Q93084 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.63□□□□□ -2.15
ATP2A3Q93084 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.63□□□□□ -2.15
ATP2A3Q93084 MIR5197-201ENST00000583721 112 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 AL022345.2-201ENST00000606307 135 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 AC015726.2-201ENST00000620112 122 ntBASIC1.63□□□□□ -2.15
ATP2A3Q93084 AL391516.1-201ENST00000554380 2449 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 Y_RNA.37-201ENST00000362606 108 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 RNU6-1292P-201ENST00000383856 107 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 Y_RNA.617-201ENST00000410920 90 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 AC009474.2-201ENST00000451383 136 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 SNORA31.4-201ENST00000516049 129 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 SNORD33.1-201ENST00000516213 88 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 Y_RNA.712-201ENST00000517011 92 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 RNU6-902P-201ENST00000517212 91 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 AL645939.4-201ENST00000604495 135 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 AL121890.5-201ENST00000620848 304 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 AC106754.2-201ENST00000623006 233 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 MIR3914-2-201ENST00000637339 95 ntBASIC1.62□□□□□ -2.15
ATP2A3Q93084 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 SNORD115-28-201ENST00000363931 81 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 SNORD58C-201ENST00000365223 64 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 Y_RNA.353-201ENST00000365440 108 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 Y_RNA.494-201ENST00000384432 111 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 Y_RNA.563-201ENST00000384707 108 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 Y_RNA.629-201ENST00000411368 105 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 AC015922.2-201ENST00000435593 184 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 AC027119.1-201ENST00000440877 241 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 Y_RNA.692-201ENST00000516627 105 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
ATP2A3Q93084 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
ATP2A3Q93084 MIR526A1-201ENST00000384897 85 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 MIR136-201ENST00000385207 82 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 RPS27P16-201ENST00000425758 201 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 RNU6-322P-201ENST00000516010 103 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 AC090049.2-201ENST00000550377 109 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 AL359881.1-201ENST00000602916 267 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 MIR6129-201ENST00000616087 109 ntBASIC1.6□□□□□ -2.15
ATP2A3Q93084 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATP2A3Q93084 Y_RNA.273-201ENST00000364703 102 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 Y_RNA.366-201ENST00000365540 102 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 RNU6-44P-201ENST00000384045 107 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 MIR516B2-201ENST00000385190 85 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 MIRLET7F2-201ENST00000385277 83 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 RNU6-1061P-201ENST00000516530 99 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 Y_RNA.757-201ENST00000578934 114 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.59□□□□□ -2.15
ATP2A3Q93084 Y_RNA.81-201ENST00000362997 102 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 RNU6-1325P-201ENST00000364905 105 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 SNORA2.2-201ENST00000365473 135 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 Y_RNA.440-201ENST00000384120 114 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
ATP2A3Q93084 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 RNU7-181P-201ENST00000517234 74 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 FAM106DP-201ENST00000586416 501 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 HSPE1P19-201ENST00000603327 295 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 AC134878.1-201ENST00000619901 243 ntBASIC1.58□□□□□ -2.16
ATP2A3Q93084 RNU6-42P-201ENST00000384165 107 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 MIR7-2-201ENST00000384970 110 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
ATP2A3Q93084 RN7SKP19-201ENST00000516016 252 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 AP003484.1-201ENST00000530974 250 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 AC133485.4-201ENST00000561835 220 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 AC138907.4-201ENST00000570107 226 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
ATP2A3Q93084 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 SNORD18B-201ENST00000365659 72 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 RNU6-1189P-201ENST00000383958 107 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 AL451046.2-201ENST00000403074 277 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 SNX2P2-201ENST00000424553 323 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 RNU6-240P-201ENST00000516098 97 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 RNU6-917P-201ENST00000516294 104 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 RNU6-830P-201ENST00000516353 107 ntBASIC1.56□□□□□ -2.16
ATP2A3Q93084 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ATP2A3Q93084 RNU6-349P-201ENST00000362402 107 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 SNORA63.4-201ENST00000362763 126 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 RNU6-476P-201ENST00000384726 107 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 MIR653-201ENST00000385279 96 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 SNORD28B-201ENST00000390993 75 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 MTATP6P29-201ENST00000415057 132 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 AL035461.1-201ENST00000421490 332 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 RN7SKP179-201ENST00000516126 217 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 MTND5P34-201ENST00000568888 325 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 SNORA4-201ENST00000584302 138 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 AL078603.1-201ENST00000603824 313 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
ATP2A3Q93084 RNU6-647P-201ENST00000364243 107 ntBASIC1.54□□□□□ -2.16
ATP2A3Q93084 RNU4-16P-201ENST00000364737 141 ntBASIC1.54□□□□□ -2.16
ATP2A3Q93084 Y_RNA.410-201ENST00000383992 113 ntBASIC1.54□□□□□ -2.16
ATP2A3Q93084 RNU6-1144P-201ENST00000384247 104 ntBASIC1.54□□□□□ -2.16
ATP2A3Q93084 RNU6-1064P-201ENST00000410626 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms