Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TRMT112P2-201ENST00000512910 132 ntBASIC1.14□□□□□ -2.23
RAB40AQ8WXH6 RNU6-182P-201ENST00000516970 105 ntBASIC1.14□□□□□ -2.23
RAB40AQ8WXH6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.14□□□□□ -2.23
RAB40AQ8WXH6 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
RAB40AQ8WXH6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 MIR302B-201ENST00000362188 73 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 MIR337-201ENST00000362281 93 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 RNU6-682P-201ENST00000363843 106 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 RNU6-913P-201ENST00000390913 95 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 MIR548I3-201ENST00000408378 149 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 RNU6-321P-201ENST00000410912 106 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 RNU7-70P-201ENST00000516941 66 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 MIR6516-201ENST00000630554 81 ntBASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RAB40AQ8WXH6 RNY1P10-201ENST00000363268 113 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 RNU6-654P-201ENST00000364373 107 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 RNU6-768P-201ENST00000384683 107 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 RNU6-239P-201ENST00000390990 99 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 RNU6-794P-201ENST00000517261 64 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 AC023827.1-201ENST00000569247 97 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 MIR3671-201ENST00000580455 88 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 AP000753.3-201ENST00000604083 169 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.12□□□□□ -2.23
RAB40AQ8WXH6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 RNU4-84P-201ENST00000364200 139 ntBASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 AC091932.4-201ENST00000623386 200 ntBASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RAB40AQ8WXH6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 SNORA1.1-201ENST00000364671 133 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 RNU5E-9P-201ENST00000411164 104 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 MIR4781-201ENST00000585250 76 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 AL020996.3-201ENST00000606617 222 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 AL596211.1-201ENST00000569873 2277 ntBASIC1.1□□□□□ -2.23
RAB40AQ8WXH6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 RNU6-125P-201ENST00000384505 107 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 SNORA75.5-201ENST00000391291 81 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 MIR4264-201ENST00000583520 66 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 AC131055.1-201ENST00000584626 316 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 MIR6844-201ENST00000637122 62 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 Z97988.1-201ENST00000637697 135 ntBASIC1.09□□□□□ -2.23
RAB40AQ8WXH6 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 RNA5SP95-201ENST00000410319 137 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 RNA5SP261-201ENST00000410536 106 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 SCARNA15-202ENST00000516881 127 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 MIR3646-201ENST00000578301 84 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 MIR8055-201ENST00000610739 97 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 AC106800.4-201ENST00000614905 153 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
RAB40AQ8WXH6 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 SNORD113.3-201ENST00000364630 78 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 RNU6-818P-201ENST00000364837 108 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.441-201ENST00000384123 112 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 SNORD37.2-201ENST00000391075 66 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 AC108059.2-201ENST00000434626 151 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.07□□□□□ -2.24
RAB40AQ8WXH6 MTND5P32-201ENST00000560711 1802 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 RNU6-205P-201ENST00000390858 107 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 AC074198.2-201ENST00000508153 258 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
RAB40AQ8WXH6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 242.8 ms